Solanum stenotomum: 125848433
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Entry
125848433 CDS
T08385
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125848433
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125848433
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125848433
NCBI-ProteinID:
XP_049384252
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Position
12:complement(38900872..38902981)
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AA seq
381 aa
AA seq
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MSSLALVLTLLFLGISTLQAEYYAPSKNYAPSTTKKTMNVIDSCWRAKSNWAKNRYALAD
CAVGYGKAAIGGKNGAIYVVTNPSDDPVNPKPGTLRYGAIQSKPLWIIFNKDMVITLKNE
LMINSYKTIDGRGAEVEIAYGPCITIQHVSHVIIHGISIHDCKPGKKGIVRDSPVHAGHR
NGADGDGIDIFQSTHVWIDHCYLARCTDGLIDVIHASTGVTISNNYFTQHDKVMLFGHND
NNIEDKVMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIFSEG
NYFLASKSTQVTKRESKNGWQNWKWRSSKDKFLNGAYFIPSGYGTTNPYYSKAQSFPVAD
GSMVPSLTADAGPLHCTSYKC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttagcacttgtacttactcttctttttttgggtatctcaactttacaagcc
gaatactatgcaccaagtaaaaactatgcaccttctactactaaaaaaactatgaacgtg
atcgattcatgttggcgtgccaagtcaaactgggccaagaatcgctatgcattagccgat
tgtgctgtcggctacggcaaagcagctatcggtgggaaaaacggtgcgatatacgtcgtt
actaatccgtccgacgacccggttaaccctaaaccgggtacactaagatatggtgcaatc
caatctaaaccactatggattattttcaacaaggatatggttataacgttaaagaatgaa
cttatgatcaatagttacaagactattgatggaaggggtgcagaagttgaaattgcatat
ggaccttgtataacaattcaacatgttagtcatgtgattatacatgggataagtatacat
gattgtaagccggggaaaaaaggtatcgtccgggatagtccggtgcatgcaggccatcgt
aacggcgccgacggagacggcattgatatatttcaatcgactcatgtttggatcgaccat
tgttatcttgcacgttgtaccgatggacttattgacgttattcatgcttctactggtgtt
accatttcaaataactacttcactcagcatgataaagttatgttatttgggcacaatgat
aacaatatagaagataaggttatgaaagtcacagtagccttcaactactttggccctggt
ttaattgaaagaatgccaagagtgaggctaggttatgctcatgtggccaacaatcgttac
gaaaaatggttgatgtatgctattggtggaagtgctaatccaaccatctttagtgaagga
aactatttcttggcatctaaatccacacaagttacaaaaagggaatctaagaatggatgg
caaaattggaagtggaggtcttcaaaggataaattcttgaatggagcctattttatacca
tctggttatgggactactaatccatattattcaaaggctcaatcatttcctgtggctgat
ggatctatggttccttctttaactgctgatgctggacctttgcattgtacttcttataaa
tgttaa
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