Solanum stenotomum: 125848466
Help
Entry
125848466 CDS
T08385
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125848466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125848466
03110 Chaperones and folding catalysts [BR:
sstn03110
]
125848466
04121 Ubiquitin system [BR:
sstn04121
]
125848466
Enzymes [BR:
sstn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125848466
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125848466
Complex C
U4/U6.U5 tri-SnRNP related factors
125848466
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125848466
Chaperones and folding catalysts [BR:
sstn03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125848466
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
U-box type E3
125848466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
U-box
Rtf2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125848466
NCBI-ProteinID:
XP_049384286
LinkDB
All DBs
Position
12:complement(44642471..44647795)
Genome browser
AA seq
596 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKELKTPFKRLPFYCCALTFTPFEDPVCTKDGNV
FEIMHIVPYIRKYGRNPVTGAPMKQEDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVR
TTGNVFCYEAVKELNIKTKNWKELLTDEVFSREDLITIQNPNALDTKVLLDFDHVKKSLK
VDDEEIQKMQSDPTYNINITGDIKQMLKELGSEKAKEIALHGGGGNKAQNERAAALEAIL
AARSRIKDDAKTKENGEGTAKQTFSIVDAASASVHGRSAAAAKAGSTDKTAARIALHMAG
ERTPVNAKLVKSRFTTGAASRSFTSTSYDPVTKNEYEYVKVEKNPKKKGYVQLHTTHGDL
NIELHCDITPRACENFITLCEQGYYNGVAFHRNIRNFMIQGGDPTGTGKGGESIWGKPFK
DEVHSKLLHSGRGVVSMANSGPHSNGSQFFILYKSATHLNFKHTVFGMVVGGLPTLSTME
KVPVNDDDRPLEEIKIISVEVYVNPYAELDEEEEKTNDDNKTEDEDNEKVGSWYSNPGTG
TSDIQAVGSGIGKYLKARAAQADSKTSSDSSLPPISAAKKRKTGTSTAELKDFSAW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacaacacagtaaagatcgaatgttcataaccaagacagaatgggcaact
gaatggggtggcgctaaatccaaagaacttaaaaccccttttaaacggcttcccttctat
tgctgcgctcttacgtttacaccgtttgaggacccagtatgcacaaaagatggcaatgtc
tttgaaataatgcatatagttccatacatcaggaaatatgggaggaatccagtgactggg
gcacctatgaagcaagaagacttaattcctcttactttccacaagaattctgaaggagag
tatcactgtcctgtcttgaacaaggtttttacagagttcacacatatagttgctgtaaga
actacgggaaatgttttctgttatgaggcagttaaagaactgaatatcaaaacaaagaac
tggaaggagcttctcactgatgaagtattctctagagaagaccttataacaattcaaaat
cctaatgcactggacaccaaggtgcttctagattttgatcatgttaagaaaagtttaaag
gttgacgatgaagaaatacagaaaatgcagtctgacccaacatacaacataaatattact
ggggacatcaaacaaatgctcaaggaacttggaagtgagaaagcgaaagagattgcactg
catggtggaggtgggaacaaggcacagaatgaaagagctgctgctcttgaggctatttta
gctgcaagatcacgtatcaaagatgacgcaaaaacaaaagaaaatggagaaggaacagcg
aagcagactttcagcattgtggatgctgcatctgcatcagttcatggaagaagtgctgct
gctgcaaaggctggttcaactgataaaacagctgcgcggatagctttgcacatggcgggt
gaaaggactccagtaaatgctaagctggttaagagtcgttttaccactggtgctgcttct
cgatccttcacttccacctcctatgatccggtaacaaagaatgaatacgaatatgttaaa
gttgagaaaaatcccaagaagaaaggttatgtccagctgcatacaacacatggtgatttg
aacattgagcttcattgtgacataactccaagggcatgtgagaacttcattactctttgt
gaacaaggatattataatggagtagcttttcacagaaacatccgaaatttcatgattcaa
ggtggtgacccaactggcacagggaaaggaggtgagtcgatctggggtaagcccttcaag
gatgaagtgcactccaagttgctgcattctggtagaggtgttgttagcatggctaactct
ggtcctcactcaaatggctcacagttcttcatcctgtacaagtctgccactcacttaaat
ttcaaacatacagtctttggtatggttgttggaggcttgccaacactttccaccatggag
aaagtccctgttaatgacgatgaccgacctctggaagaaatcaagataataagtgtagaa
gtttatgtaaacccctatgcagagcttgatgaagaagaggagaaaacaaatgatgacaac
aaaactgaagatgaagacaatgagaaggttggatcatggtacagcaaccctggaactgga
acctcagatattcaagctgttggcagtggtattggcaagtatttgaaagcaagggctgca
caggccgattccaaaacttcttctgatagcagtctgccacctatttctgcagcaaagaag
agaaaaacaggcacatcaacagcagaacttaaagatttttcagcatggtaa
DBGET
integrated database retrieval system
