Solanum stenotomum: 125848471
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Entry
125848471 CDS
T08385
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125848471
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125848471
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
125848471
NCBI-ProteinID:
XP_049384291
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Position
12:31174394..31176036
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AA seq
393 aa
AA seq
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MSPLAFFFLFLINSSLAANTNIYNVQNYGAKSDGKTDSSKAFLNAWAAACASTSPATINV
PSGKYLIHNAYFNGQTCKSKAVTIHIDGTLLAPSDYNVIGNDENWIKFEKVNGISIYGGT
FDGQGAALWACKKSNNKKCPDGTTALTFYNSNNIIMSGVTVQNSQKFQILVDGCHNVKLQ
GMKVLAQENSKNTDGIHVKLSSGISIVNSQIGTGDDCVSIGPGTSNLWIEGIACGPGHGI
SIGSLGWKEQELGVQNVTIKTVTFTGTTNGVRVKTWARPSNGFVRNILFQHIVMVNVQNP
IIIDQNYCPNHDESCPQQSSGIKISDVTYQDIHGTSATKVAVKLDCSTTNPCSGIVLEDL
NLSYQNQQTEASCVNARGRVSGLQKPTNCLLKN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcatttttcttcctcttcttaatcaactcatcattagcagctaatacc
aatatttacaatgtccaaaattatggagcaaaatccgatggaaaaactgattcatccaaa
gcttttttgaatgcatgggcagcagcctgtgcttctactagccccgccactattaatgtg
ccaagtggaaaatacttgattcacaatgcatatttcaatggacaaacatgcaagagcaag
gctgttactatacacattgatgggactctcttagctccatctgattataatgtgattggc
aatgacgaaaattggataaaatttgaaaaagtcaatggcatttccatctatggtggaacc
tttgatggtcaaggtgctgctctttgggcttgcaagaaatccaacaacaagaaatgccct
gatgggactacggcattgactttttacaactcaaacaacattataatgagtggagtaacc
gtacaaaatagtcaaaagtttcaaatattagtagacggatgccataatgtgaagctacaa
ggaatgaaggtattagctcaagaaaatagcaaaaacactgatggaattcatgtaaaatta
tcatcaggaattagtattgtgaactcacaaattggtactggagatgattgtgtatctatt
ggtcctggaacttctaacttatggattgaaggcattgcatgtggccctggccatggaata
agcattggaagcttaggctggaaagagcaagagttgggagtccaaaatgtgacaattaag
actgtgacttttactggaacaacaaatggtgtgcgagtcaaaacttgggcaaggcctagc
aatggatttgttagaaatattctctttcaacatattgttatggttaatgttcaaaaccca
attatcatagatcaaaattactgccctaatcatgatgagagttgtcctcagcagagctcg
ggcataaagataagtgatgtaacatatcaagatatacatggaacatcggctacgaaagtt
gcagtgaaacttgattgtagcacaactaatccatgtagcggcatagtacttgaagatctg
aatcttagttaccaaaatcagcagactgaagcttcatgcgttaatgccagaggaagagtt
tctggtttacaaaaacctaccaattgcctattgaaaaattag
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