Solanum stenotomum: 125848530
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Entry
125848530 CDS
T08385
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125848530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125848530
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125848530
Membrane trafficking [BR:
sstn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125848530
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125848530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
125848530
NCBI-ProteinID:
XP_049384371
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Position
12:13388361..13408681
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AA seq
369 aa
AA seq
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MENKGEGTEAQKYIWEGAIPLQIHLHESEVTTLPTPPPAMILAPRIGYLPLLAQKVKPFF
SNSLPPGVDTIWFEYNGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNVLTPCDS
EDSVKWSFINSFKEAAYIINGNCKNVMNMSQSDQLELWRSIMDGNLDSYLRISSKLKFGI
LVDGFSIQLNSSSPKSPESTQNADGPAPAKTGRIPVRLYVRTINEDFDELKDAPVVEGWD
RISYINRPVEIHGDGKCFTLYDAMTKLLPEFFGEKLPPKDDVSKEEVEVEQRLSPEETNK
SNTEQSGEKLNEGIVSCSVSDGAEIKLLRIQGIEPKMEIPFAWVVNNLMNPDHFLHICVY
VKIQEPITI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaggagaaggaactgaagcacagaaatatatatgggaaggagcaattcct
ctgcagattcatcttcatgaatccgaagtcactactctccctactcctccccctgctatg
attttagctcctcgaattgggtacctgcctcttttagcacaaaaagtaaagcctttcttc
agtaattcacttcctccaggtgtagataccatatggtttgagtacaatggcttgcctctc
aaatggtatatacctactggggtactctttgatcttctttgtgcagaacctgaacggcct
tggaatctgacggtacattttagaggatatcctggaaatgttttaacaccctgtgacagc
gaagatagtgtaaaatggagctttatcaattcatttaaagaggcagcatatataatcaat
gggaactgcaaaaatgtaatgaatatgtcccaatctgaccaattagaactctggcgctcc
attatggatggtaatttagactcttatcttcgaatctcatctaagcttaaatttggcata
cttgtggatggtttttcaatacaattgaacagttcctctcctaaatcaccggaaagcact
caaaatgcagatggcccagcaccagctaaaacaggtagaataccggttcgactgtatgtt
agaactatcaatgaggattttgacgagttaaaagatgcacctgttgttgaaggttgggac
agaatctcttacataaacagacctgttgagatccatggagatggtaaatgcttcaccttg
tatgatgcaatgacaaaacttctgcctgagttttttggggaaaaacttccgccaaaagat
gatgtatctaaagaagaagttgaggttgaacagagattatctcctgaagaaacaaacaag
agcaacacggaacaaagtggggagaagttaaatgagggcatcgtctcctgctctgtttca
gatggtgctgagatcaagctcctgcgcattcaaggaattgaaccaaagatggagattcct
tttgcatgggtggtaaacaatttgatgaaccctgatcactttcttcatatttgtgtgtat
gtcaaaattcaagaacccatcaccatatag
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integrated database retrieval system
