Solanum stenotomum: 125848708
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Entry
125848708 CDS
T08385
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
KO
K14793
ribosomal RNA-processing protein 9
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125848708
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
90S particles
Other 90S particles
125848708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
VPS8_N
WD40_like
TEA
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125848708
NCBI-ProteinID:
XP_049384592
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Position
12:complement(28649892..28658199)
Genome browser
AA seq
517 aa
AA seq
DB search
MKNLKKKKASAQNTQKGSKKRFSVESDPFFNDDNDLKRRKRFGDDEDIESSDDSEDIYGS
DDEGVDRNERKDEEEEEEEEETAAEKRKRLAETFLHSMRESKRKEEEERESGEEYDREER
EAMRDSWMVDMLQKEQMEGSGRSRKAIASRIQKPTKGFHILVKHRQSVTAVTLSDDDLKG
FSSSKDGTIVSWDVDSGKTEKYAWPTDEALKSHGAKEPQGRATKHSKHVLALAVSSDGRY
LASGGLDRHIHLWDARTRQHIKAFPGHKGPVSCLTFRQGSSELFSGSFDRSIKIWNVEDR
AYVNTLFGHQSEVLTIDSLRKERVLTVGRDRTMHLWKVPEESQLIFRAPATSLECCCFIN
NDEFLSGSDDGSIEHWNVTRKKPVHIVKNAHASLQSVGIEQSNGALSNGHMENGTLNPQC
HSSSALSWVSALTVCRNSDLAASGAGNGSVRLWTIENESKGIQPLFELPVAGFINSLVFS
KSGQFLVAAVGQEPRLGRWGRIADVRNGVFVHPLNHS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgaaaaagaagaaagcttcagctcaaaacacccagaagggtagtaagaag
agattttcagttgaaagcgacccatttttcaatgacgacaacgacttgaaaaggcgaaag
agatttggagatgatgaagatattgagagcagtgatgattcagaggacatttatgggtct
gatgatgaaggagtggataggaatgagaggaaggatgaagaagaagaggaggaggaggag
gagacggcagctgagaagagaaagaggctggcggagacatttttgcatagtatgagggag
tcgaagaggaaggaagaggaagaaagagagagtggagaggaatatgatagagaggagagg
gaagcaatgagagactcatggatggtagacatgttgcagaaggagcagatggagggcagt
ggtcgttccagaaaagctattgcttccaggattcaaaagcctaccaagggatttcacatt
ttagtgaaacatcgacagtccgtaactgctgtgactttatctgatgatgacttgaaggga
ttttcatcttctaaagatggtactattgttagctgggacgtggacagtggaaagacagaa
aagtatgcatggcctactgatgaagcattgaagtcacatggtgcaaaggagccacaaggt
cgagcaacaaaacatagtaagcatgttttagctttggctgtcagctctgatggacgctat
ttggcaagtggaggcttggaccgtcacattcatttgtgggatgcccgaacacggcagcat
attaaggcattccctggtcataagggacctgtttcatgtttgacattcagacaaggatct
tctgaactgttttcagggtcgtttgatcgatccatcaagatatggaatgtggaagataga
gcttatgtaaatactttatttggtcatcaaagtgaagttctaaccattgattctttgagg
aaagaaagggttttgacagttggacgagaccgaaccatgcacttatggaaggttccggag
gaatctcaattgatatttcgtgctccagcaacttcccttgaatgctgttgtttcatcaat
aatgatgagtttctatctggttctgatgatggaagtattgagcactggaacgtaacaagg
aagaagcctgtccacattgtaaaaaatgcacatgcttcattgcaatcagtgggaattgaa
cagagcaatggggccctatcaaatggccacatggaaaatggcacccttaatcctcagtgt
cattcctcttcagcactctcttgggttagtgcgctgacagtctgcagaaatagtgatctt
gcagcatcaggagctggcaacgggtctgttcgactgtggacaattgaaaatgaatcaaaa
ggcatccagccattgtttgagctcccagtggctggatttataaattccttagttttttca
aaatcaggacagttcttggttgctgcagtagggcaggaacctcgcctaggaaggtgggga
cgtattgctgatgttcgaaatggagtttttgtgcatcctttgaatcattcgtga
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