Solanum stenotomum: 125848775
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Entry
125848775 CDS
T08385
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125848775
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125848775
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
125848775
NCBI-ProteinID:
XP_049384663
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Position
12:47776637..47785692
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AA seq
467 aa
AA seq
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MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHATPPAW
HNPQSGPVQSSAGYATTGTVPGQAPPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAPAYAT
AVHPPGSSQQTNHISTGSRPFSVSQPFQPSTMPPGGVPPPGHAPYHG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccgggcaacagcagtttcggtacacgcagacaccttcgaaagttcttcac
ctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagcccttt
ggtaaaattgtcaatacaaagtgcaacgtcggggccaatcgcaaccaagcgtttgtcgaa
tttgctgaccttaatcaggcaatcaacatggtttcatattatgcttcatcttcagagcct
gctcaagttcgtggcaagacggtgtacattcagtattctaacaggaatgaaattgtcaat
aataagagtcccggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaa
gctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaa
aagatcgctacttttgagaaggctgcaggttttcaggcattgattcaatttagtgatgtt
gggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtaccttctt
ccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaat
atcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcct
actgcaatggagggggttcttcaacctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgtcgatgtc
cttaacacggttttctctgcatttggtactgttcagaagatcgctatatttgagaagaat
ggtcaaacccaggcattaattcagtatcctgatgtaacaattgcagctgctgcaaaggac
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatgtacaggcatacagtgacaaaagtagagactacacagttcca
gaatcaagtttgcttgcgatgcaacaagcatctgcagtccatgccacaccacctgcttgg
cataatcctcagtctggtccagtacagtcatcagctggctatgccactactggtactgtt
cctggccaagcaccacctgcatggaatccaaatttgcagggtggaggatcaacctttcca
tcggctcctactggatatcctggtcattcatatgctccaccagctcctgcttatgcaact
gcagtacatcctcctggatcgtcacagcagaccaatcacatttctactggtagtcgacct
tttagtgtaagtcagccttttcagccatcaaccatgccgcctggaggtgttcctcctcct
gggcatgcaccttatcatggttaa
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