Solanum stenotomum: 125848813
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Entry
125848813 CDS
T08385
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125848813
Enzymes [BR:
sstn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
125848813
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125848813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
125848813
NCBI-ProteinID:
XP_049384710
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All DBs
Position
12:complement(37571181..37577199)
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AA seq
637 aa
AA seq
DB search
MAGPKLGKKSGSKLGKLPAKKKQKKEPLPAKPLEKEELFSDSEGTDGDFQEDDEQEINSD
SEMSSDIDDPFAADILGSGDADDGSDVNSDSNADSDSDADDNDLVRKSKAIDDERKREEE
DNDLELQLNIKEEADDFRLPTTEELEEETQRPPDLSNLQRRIKEIVRVLSNLKSLRQEGV
TRKDYVDQLKSDLGSYYGYNDFLIESLVELFPPVELIELIEAFEKPRPISLRTNTLKSRR
RDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLPVMALA
PQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTNTIVCN
YDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAPDIQNCSQLQKELILAAI
DMVDANSKSGGYIVYSTCSIMVEENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRQHRF
HTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSSVQSEEVEGAESIENSDQQDSEE
DDDKHSDKKGIANENRKLKEEVAGDKKRKRDVQTHSVKKGAGQNSGATKNGKAENQMVAT
KKREKKKPLPREEIAKAREEKRNALREATRKATMKNK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcccaagctcggtaagaaatcaggttctaaattagggaaactccctgccaag
aagaagcaaaagaaggaacctttgccagctaagccactggaaaaggaggaactttttagt
gatagtgaaggaacggatggggattttcaagaagatgatgaacaggaaattaattcagat
tctgagatgtcttctgacatcgatgacccctttgctgctgatatattaggaagtggtgat
gctgatgatggttcagatgttaattcggattcaaatgcagattctgactctgatgcagat
gataatgatcttgtaaggaagtctaaagctattgatgatgaaaggaaaagagaagaagag
gacaatgatttagaactgcagctcaatattaaagaagaagctgatgatttcagactgccg
acaactgaggagcttgaagaagaaacacagcggcccccggatctctctaacctccaaagg
aggataaaagagattgttagagtgctttcaaatttgaagtcattgaggcaagaaggtgtg
acacgtaaggattacgttgatcaacttaaaagcgacttgggttcatattatggatacaat
gattttctgattgagtcattggtggagttgtttccccctgttgagctgattgaacttatt
gaagcatttgaaaaacctagaccaatttctctacggacaaacactttgaagtctcgcaga
cgggatttagctggcgttcttcttaacagaggtgtcaatttggacccattaagcaaatgg
tcaaaggttggactagttgtatatgattctcaagttccagttggtgccactcctgagtat
atggctggtcattacatgctccaaagtgcaagctcttttctgcctgtaatggcccttgcc
ccccaggagaatgaacgtgtcgttgatatggctgctgctcctggaggcaaaacaacttat
gttgctgcactgatgaaaaatagtggtattatttatgcaaatgagatgaaggagtcaaga
cttaaatctctcactgccaatttacatcgcatgggggtaacaaacaccattgtctgcaac
tacgatggaagagagttgcctaaagttttgggtcagaacactgctgataggattttgctg
gatgctccctgcagtggcactggggtaatctccaaggatgaatctgttaaaacttccaaa
actgcacctgatatacaaaattgctcacaactgcagaaggaactaatacttgcagcaatt
gacatggttgatgccaactcaaaatcaggtggatacattgtgtattcgacctgctccatt
atggttgaagagaatgaagcagttatagattatgcactcaagaagagagatgttaagctt
gtgccatgtggacttgattttgggaggcctggatttattcggtttaggcagcaccgtttc
cacacatctttggacaagacaaggcgattctatcctcatgtgcacaacatggatggattc
tttgtagccaagttgaaaaagatgagcaattctaagtctgctgctaaatcgtcggttcag
tctgaagaagtagaaggtgctgaaagcattgagaacagtgaccagcaggattctgaagaa
gatgatgacaagcattcagataaaaaaggcattgcaaatgagaataggaaattgaaagag
gaagtagcaggtgataaaaagaggaagagggatgtccaaacacattcagttaagaaaggt
gctggacaaaacagcggtgcaactaaaaatggaaaagcagaaaaccaaatggtggcaaca
aaaaagagggaaaagaagaaaccccttcctagagaggaaattgcaaaagctagggaagag
aagaggaacgcccttagggaagctacacgaaaagccacgatgaagaacaaatga
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