Solanum stenotomum: 125848884
Help
Entry
125848884 CDS
T08385
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125848884
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125848884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
F-box
F-box-like
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_4
F-box_5
LRR_EndoS
DUF505
Motif
Other DBs
NCBI-GeneID:
125848884
NCBI-ProteinID:
XP_049384790
LinkDB
All DBs
Position
12:complement(49435227..49437181)
Genome browser
AA seq
460 aa
AA seq
DB search
MNMDSILCDELLQEIFRRLPPSSAAAVSLVCKRWLHLLRSSTTSLSICLIEPPFIPLFSS
FLSFHPFLSTVSVTITPTVDSSDQLLNSVASSCPNLRHLRFLNGPVSTLSLFSLSVSCPN
LVSLAVTLFRPLSFLWVPPFGCLKELSIYPAGNSGEFDYGDFDGSCELNLESLLLTGIKS
GDKGVGFLWRNCKKVSTLKLISCEEVGDQGSFLGFLQCLEGLQELELRTCRTIADGVLLK
LAENCDMLNSLLVYDGGSKEGLFHFLTQSKCGNLQNLDLRLPLDLDNNHLTAAAENLGSL
RSLRLQSCCLVTGEGLKILGNAMADGLEELALINCDVVERESGLLTTLGQDLKRLRKLDL
SFNDMLLDKELISMLVSCNNLNELKVRGCKKLTNLSMVSLTKCCKKLQSVDVMYCCGIEA
HGVELFVLNSPKLRLLQVEENKVSDVARTWASNKFIEVVP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggattcgattctctgtgatgaacttctccaagaaatattccgccgccttcct
ccgtcgtccgccgccgctgtttcattagtctgtaagcggtggcttcatcttcttcgctct
tcaactacttctctttctatctgtttaattgaacccccttttatccctcttttctcctct
tttctcagttttcatccttttttgtctactgtttctgttaccattacacctacagtagat
tcctccgatcaattgcttaattccgttgcttcttcttgccctaatctccgccatctccga
ttcttgaatggtcctgtttctactttatctctgttttctctatctgtttcttgccctaat
cttgtttctcttgctgtaactctttttagacccctttcttttctctgggtaccccctttt
gggtgtctaaaagaactctcaatttacccagctggaaattcaggggaatttgattatggt
gactttgatggttcttgtgagttgaatttggagagtcttttgttgactggaattaaatca
ggggataagggggttggttttttatggaggaattgcaaaaaggtgtcaactttgaagctg
ataagctgtgaagaggttggtgatcaaggttcttttttaggatttcttcagtgtttagag
ggtcttcaagaattggaattgagaacttgtaggacaattgctgatggggttttgttgaaa
ttggctgagaattgtgatatgttgaactctttgttggtctatgatggtggtagtaaagag
gggttgtttcatttcttgacccaaagcaaatgtggtaatttgcagaatcttgatttaagg
ttgcctcttgatcttgacaacaatcatttgacagctgctgctgaaaatttagggagtttg
aggagtttaaggctacaaagttgctgtcttgttactggtgaagggctaaagattcttgga
aatgctatggctgatgggcttgaagaattggctttgataaattgtgatgtagtggaaaga
gaatcaggtttgttgactacattaggacaagatttgaaaagattaaggaaattagacttg
tcttttaatgacatgttacttgataaagaactgatatcaatgctagtatcttgcaacaat
ctgaatgaattgaaggtaaggggttgcaaaaagttgacaaatttatctatggtttcattg
actaagtgttgcaagaaattacaaagtgttgatgtaatgtattgttgtgggattgaggca
catggtgttgagttatttgtgttgaattcaccaaagttgagactgttacaggttgaggaa
aataaggtttctgatgtggctaggacatgggcatcaaataaattcattgaagttgttcct
tga
DBGET
integrated database retrieval system
