Solanum stenotomum: 125848912
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Entry
125848912 CDS
T08385
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125848912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125848912
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125848912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Nup35_RRM_2
DUF5663
Motif
Other DBs
NCBI-GeneID:
125848912
NCBI-ProteinID:
XP_049384833
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All DBs
Position
12:complement(18846884..18849973)
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AA seq
381 aa
AA seq
DB search
MESNCVQGKIFVGGISVETSEEILTQHFSRYGEVVKSQVIKFRETNCGKGFGFVTFADSS
VIDQLLHQQHIILGRTVDVKLAIPKGASGQCQLGSECPHFERQNSNSKSNRRKIFVGGLP
MNLLEEDFKTSFEKFGTIEQVNLISDKETKTPRGFGFVTYDSEESVTHVLQEKLHWLINK
YVEVKKAEPRERRVVNSSYYHNFYPTNSGYGMWQFYDCNNNGIFSPYYCHNHTMVPTNWT
SLGTNLYVPPQPVVPYFTPTYPYPVNCYGSTHNQVDDNRGSYSTFVQNNVVNQGNGQGCN
NIEVQLVGNGSLPANESAKPLEKETDNGEKDDLEKIPQDNTKENNGEKDHLVKIPQDNTK
ENNGGKDHLLKILQVNTEDDT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaattgtgtgcaagggaaaatttttgttggcggaatatcggtggagacaagt
gaagaaatacttacgcaacactttagtcgttatggagaagtggtgaagtcacaggtaatc
aaatttagggagactaattgtggaaaaggctttggttttgttacgtttgccgattcttct
gttatcgatcaacttcttcatcagcaacatataatccttggaagaacggttgatgttaaa
ttggcgatacctaaaggtgcaagcggtcaatgccaacttggttcagaatgcccacatttt
gaaagacaaaatagcaatagcaaaagtaacagaagaaagatttttgttggtggattgcct
atgaatttattggaagaagattttaaaacgtcttttgaaaaatttggaacaattgaacaa
gttaaccttatctcagataaagaaaccaaaacgccccgaggatttgggtttgttacttat
gattcagaagaatctgtaacacatgtattgcaagagaaacttcactggttgataaataaa
tatgttgaggtcaaaaaagcagagccaagggaacggagagttgtgaatagtagttattat
cataatttttaccctacaaattctggctatggaatgtggcaattttatgattgtaataat
aatgggattttttccccttattattgccacaatcatactatggtacctactaattggact
agtttgggtacaaatctatatgttcccccacagcctgtggtaccatattttacccctaca
tatccatatccagtcaactgctacggttcaacgcataatcaagtggatgataataggggc
tcttactcaacttttgttcagaataatgtggtaaatcaagggaatggccaaggatgcaat
aatattgaggttcaacttgttggaaatggttcacttccagctaatgagagtgcaaagcca
ctagagaaagaaacagacaatggtgaaaaagatgacttggagaaaattccccaggacaat
acaaaagaaaacaatggtgaaaaagatcacttggtgaaaattccccaggacaatacaaaa
gaaaacaatggtggaaaagatcacttgctgaaaattctccaggtcaatactgaagatgac
acctaa
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