Solanum stenotomum: 125848932
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Entry
125848932 CDS
T08385
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125848932
03036 Chromosome and associated proteins [BR:
sstn03036
]
125848932
Transcription factors [BR:
sstn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125848932
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125848932
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
MlaC
YL1
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125848932
NCBI-ProteinID:
XP_049384859
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All DBs
Position
12:48084560..48092229
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AA seq
639 aa
AA seq
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MTDGHQFNNISLGGRGGTNTGQLKVQSGGILWKKQGGGKAVEVDKDDIVGLTWMKVPRSN
QLGVRIKDGLYYKFTGFRDQDVASLTTYFQSSCGISPEEKQLSISGKNWGEVDLNANMLA
FLVGNKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKERLLTGYKGLIHDIFTQILRGLSGSKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEE
DEDFVLDKDDGGSPTDDSGGDESDASGSGGEEEKPAKKKPKKEGTVSKPSTSRKKTDDDG
SKKKKQKKKKDPNAPKRAISAFMYFSQSERENVKKSNPGIAFTEVGRVLGERWNKLSAEE
KEPFEAMAKADKKRYSEQISDYKNPQPTVVDSGNESGSS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatcagttcaacaacatctctctcggcggccgtggaggcaccaataca
gggcaactcaaggttcagtctggaggtatattatggaagaaacaaggtggtggtaaggct
gtggaagttgacaaggacgatatagtgggccttacttggatgaaagttcctcgaagtaat
cagctgggtgtgcggattaaggatggtctttactacaaatttactggttttcgtgaccag
gatgttgcgagtttgaccacctatttccagagttcttgcgggatatctccggaggaaaag
cagctatcaattagtggaaaaaattggggagaagttgatctaaatgcgaatatgctcgct
tttcttgttggtaataagcaagcatttgagatatcattggcagacgtttctcaaacacag
cttcaaggaaaaaatgatgtcatgttggagttccatgtagatgatacaactggggctaat
gagaaagactcactgatggaaatcagctttcatatccctaattcgaacactcaatttgtt
ggcgatgaaaaccgacctcctgctcaagtttttcgtgacaaaattatgtcaatggctgat
gttggtgccggaggtgaggaagctgttgtcacatttgacggcattgccatacttactcca
aggggtcgttacaatgtggagcttcatctctctttcttgcgcttgcaagggcaagccaat
gactttaaaattcagtacagcagcgtagtccgtatttttttgttgccgaagcataaccaa
ccacacactttagtagttatcactcttgatcctccgattaggaagggccaaactttgtat
ccacacattgtattgcagtttgagacggacaatgtggtagacctttcgctggctttaagc
gaagaccttctgaatacaaaatacaaggagaggctgctaacgggttacaaaggtcttatc
catgacatctttactcaaattttacgcggcttgtctggttccaaagttactaaaccaggg
aagttccgtagcagtcaagatgggtatgcggtgaagtcctcattgaaggctgaagatgga
ctcctctatcctcttgagaagagtttcttctttttacctaaacctccaactcttatactg
catgaggagattgattatgtggaatttgagaggcatgctgcgggcacggccaacatgcat
tactttgatcttctcatcagactgaaaactgaacaagaacatcttttccggaatatccag
agaaatgagtaccacaatctttttgatttcatcagtggaaagggtctgaaaataatgaac
cttaatgaagctcgggctacagaaggtgttcctgttttgcctgatgatgacgatgatgct
gttgatccacatcttgagcgtattaagaatgaagcgggtggggatgacagtgatgaagag
gacgaagattttgtcctcgataaggatgatggagggtctcctactgatgattctggaggt
gatgaatctgatgccagtggtagtggtggtgaggaggagaaacctgcaaagaagaagcca
aaaaaggagggtactgtgtcaaagccatctacaagcaggaaaaagacagatgatgatgga
tcgaagaagaaaaaacagaaaaagaagaaggatccaaatgctccgaagagggcaattagt
gctttcatgtacttctcgcagagtgaaagggagaatgtgaagaaaagtaatcctggaatt
gccttcactgaagtagggagggttcttggagagagatggaataagctgtcagctgaggag
aaagaaccctttgaggccatggccaaggcagataagaaacgctacagcgaacagatcagt
gattacaagaaccctcagccgactgtcgtggattcagggaatgaatctgggagttcttaa
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