Solanum stenotomum: 125848938
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Entry
125848938 CDS
T08385
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125848938
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125848938
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125848938
NCBI-ProteinID:
XP_049384864
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Position
12:complement(48096986..48099322)
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AA seq
446 aa
AA seq
DB search
MRGTKLVYLSLLLFSTFLAINGHIGEFDEVWRRRAQEADEWAIKAYKPDPINVTLAFAKQ
TGQALKEIKEAKLAKNGTRRELKGGGKKYNGPCLVTNPIDRCWRCQPNWADNRKRLADCA
MGFAKGTTGGKAGEIYVVTDSSDDTSDPKPGTLRYGVIQKEPLWIIFAKSMTIRLHQELI
VQSDKTIDGRGVNVHIANGAGFMLQYVKNVIIHGLRIHDIVVGSGGMIRDAMDHIGQRTQ
SDGDGISIFGSSNIWVDHVSMWSCYDGLVDAVEGSTAVTISNSHFTDHNEVMLFGASDSS
SIDQRMQITVAYNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTIISQGNR
FIAPPDMFKKEVTKRDYSPESVWKQWSWRSQGDLFMNGAFFVESGDPDWTKKHTELFDGI
VSASGDQVTWITRFSGALNCKLGEAC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaactaagctggtatatttgtctctgttactattttccacatttttggcaata
aatggtcacattggtgagtttgatgaggtgtggaggaggagagcccaggaagcagatgaa
tgggccataaaggcttacaagcccgacccgatcaatgtcacccttgcatttgctaagcaa
actggacaggccttaaaggaaataaaggaagcgaagctggcaaaaaatggaacaaggagg
gagttaaaaggaggcgggaaaaaatacaatgggccttgcttagtcaccaacccaattgat
aggtgctggagatgccaacctaattgggccgacaatcggaaaagattagctgattgtgca
atgggatttgcaaaagggaccaccggcggaaaagctggcgagatctacgtcgtcacggat
tcttccgacgacactagcgaccctaagccgggaaccctccgttatggtgtcattcaaaag
gagccattatggatcatatttgctaaaagcatgaccattaggctacaccaggaactcata
gtacaaagcgataagaccattgatggccgcggagttaacgttcacattgctaatggagca
ggtttcatgctccagtatgtgaagaacgtgattatccacggtctccgaattcacgatatt
gtggtgggcagtggtggaatgatcagagacgcgatggaccacattggacaacggacacag
agtgacggagatggtatttctatatttggttcgtcgaatatatgggtggatcatgtgtca
atgtggagttgttatgatgggcttgttgatgctgtggagggatccactgctgttaccata
tcgaatagccatttcactgatcataatgaggtgatgctttttggtgcaagtgacagttct
tcaattgatcaaaggatgcaaattactgtggcttataatcattttgggaagagattgata
cagagaatgccaaggtgcagatggggttttattcatgtggttaacaatgactacacacat
tggaatatgtatgctattggtggtagccaacatcccactattattagtcaaggtaatcgt
ttcattgctcctcctgacatgttcaagaaagaggtaacaaagagggactattccccagaa
tcagtgtggaaacaatggtcatggagatcacaaggtgatctattcatgaatggagcattc
tttgttgaatctggagatccagattggaccaagaaacacactgagctttttgatgggatt
gtatcagcctcaggggatcaagtcacttggattacaagattttcaggggcactaaattgc
aagctaggagaagcttgttag
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