Solanum stenotomum: 125849113
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Entry
125849113 CDS
T08385
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125849113
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125849113
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125849113
NCBI-ProteinID:
XP_049385087
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Position
12:complement(49638212..49640170)
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AA seq
403 aa
AA seq
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MSTFLFTFSLLLLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP
LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ
SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN
NYFTHHDKVMLLGHSDSFTQDQGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR
QTGAGASSSTYARASSLSARPSSLVGSITTNAGPINCKKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttctcttcacattttccctccttcttctagccccactactcgtaattagt
tctatccaagacccagaacttgtcgtacaagacgttcataggagcatcaatgcgtcattg
acgaggaggaatttgggctatttatcgtgcggatcagggaatccgattgacgattgctgg
cgatgcgaccccaattgggaaaaaaatcgccagcgattagctgattgcgccattggcttt
ggaaagaatgccattggaggaaaaaatggccgaatttacgtggttactgattcagggaac
gatgaccccgtgaaccccaaacccggaactctaagacatgctgttatacaagacgagcct
ttatggatcattttcaaaagggatatggtcattcagctcaaacaagagctcgtcatgaac
tcttataaaaccatagatggtcgtggcgcgagtgttcacatttcaggtggtccgtgcatt
acaatccaccacaccagtaacattataatacacgggattaatatacacgattgtaaacag
agtggtaacggcaacattagagactcaccaaaccattccggatggtgggatgtttctgac
ggtgacggtatttcaattttcggagggaagaatatttgggtggaccattgttccttgtct
aattgccacgatggtttaattgatgcaattcatggatctacagcaatcacgatttctaac
aactattttactcatcatgataaggtgatgttgttgggacatagtgattcttttacacag
gaccaaggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaaga
atgccaaggtgtagacatggttatttccatgtggtgaataatgactatactcactgggaa
atgtatgccattggtggtagtgctgcaccaactattaatagccaaggcaataggtttctt
gctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcag
tggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcagg
caaacaggggcaggtgcatcatcatctacttatgccagagcttcaagcttaagcgctagg
ccttcttctttagttggatcaatcaccacaaatgctggtcctattaactgcaaaaaaggc
tcccgctgctag
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