Solanum stenotomum: 125849150
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Entry
125849150 CDS
T08385
Name
(RefSeq) putative pectate lyase 17
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125849150
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125849150
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NikR_C
Motif
Other DBs
NCBI-GeneID:
125849150
NCBI-ProteinID:
XP_049385128
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Position
12:complement(38896916..38898421)
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AA seq
397 aa
AA seq
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MAKSTNSLQILSWLLIICSFFTIVASKSSDEEETKSISYDPLPHKNGLLNVIDSCWRWKG
DWSSNRKALADCAIGFGSSTIGGKYGDIYVVTDSSDDPINPKPGTLRYGAIQSEPLWIIF
KRDMILTLKNELMVNSYKTIDGRGAKVEISNGPCITLDYVTNVIIHGISIHDCKPGKKGM
VRSSPEHVGERLGSDGDAISVFTSSNVWIDHCYLARATDGLLDVIHASTAVTISNNYFTE
HDKVMLLGHNDEYTADRNMKVTVVYNHFGRELVQRMPRVRHGYAHVANNYYDQWLMYAIG
GSADPTIFSEGNYFIAPDKAYNKEVTKRETEDKGWKSWKWRSSNDMFMNGAYFLPSGYGS
IAPKYTRGQLFIVAHGAFTPSLTSNAGPLQCVVNEPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaactaattccctccaaatactttcatggcttctaattatttgttctttt
ttcaccatagtagctagtaaatcaagtgatgaagaggaaactaaatcaataagttatgat
cctctgcctcacaaaaatggcctcctcaatgtcatcgattcgtgttggagatggaaaggc
gattggtcatccaatcgtaaggctttagcggattgtgcaataggctttggaagtagtacc
ataggcggtaaatatggtgacatttatgttgtcactgactcttctgatgaccctataaat
cctaaaccaggcacacttaggtatggtgcaattcagtctgagccactttggatcattttc
aaaagggacatgatacttacacttaaaaatgaacttatggtgaatagttataagactata
gatggcagaggagcaaaagtggaaatctctaatggtccatgtatcacattggactatgtc
acaaatgttattattcatgggattagtatccatgattgtaagcctggtaaaaagggtatg
gttaggagtagtcctgaacatgttggtgaaagattagggtctgatggcgatgctataagt
gtgtttacatcgtcgaatgtttggattgatcattgctatcttgctcgtgcaacggatggt
ctactcgatgttattcatgcttcaactgcagtaaccatttccaacaattacttcactgaa
catgacaaagttatgttattgggacacaacgatgaatatactgcggacagaaacatgaaa
gtcacagtagtttacaaccattttggccgtgaattagttcaaagaatgccaagggttagg
catgggtatgctcatgtggccaacaattattatgatcaatggttaatgtatgccattggt
gggagtgcagatccaacaatattcagtgaaggaaattatttcattgctcctgacaaagct
tacaacaaagaggtcaccaagagggagactgaagacaaaggatggaaaagttggaaatgg
aggtcctccaatgatatgtttatgaatggagcttattttcttccatctggatatggaagt
attgctccaaaatacacgagaggacaattgttcattgttgctcacggagcatttactccc
tctttaacttccaatgctggtcctcttcaatgtgttgtcaatgaaccttgctaa
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