Solanum stenotomum: 125849157
Help
Entry
125849157 CDS
T08385
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like
KO
K19001
ATP-dependent DNA helicase
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125849157
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125849157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Motif
Other DBs
NCBI-GeneID:
125849157
NCBI-ProteinID:
XP_049385136
LinkDB
All DBs
Position
12:complement(42684708..42692565)
Genome browser
AA seq
760 aa
AA seq
DB search
MVADEGVKDRTVADSPVSVLEDEDTCKEDLAVKLEEEVSLDPENGDATHIPENMAKEEEI
LIRARAKEEEEQLNNLKEAPILNDTQFTKLDELLTQTQLYSEFLLEKMDNITTTNVKEDE
EKSVKENKKGRGAKRKATTSYNNNKAKRAVAAMLTRSKEDVPIEDATLTEEERFEKEQAE
LVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLDGP
YLVIAPLSTLSNWLNEMERFVPSINAIIYHGDKKQRDEIRMKHMPRTTGPNFPIVITSYE
IAMSDARKFLRHYSWKYLVVDEGHRLKNSKCKLIKELKLLPIENKLLLTGTPLQNNLAEL
WSLLNFILPDIFSSHDEFESWFDLSGKFSNESEKEEMEERRRAQVVAKLHAILRPFLLRR
LKVDVEQMLPRKKEIILYATLTDYQKKFQEHLINRTLEGYLIENVSTGNGFKGKLNNLMI
QLRKNCNHPDLLESIFNGSNFYPPVEQIVEQCGKFRLLDRLLSKLFARKHKVLIFSQWTR
VLDLMDYYFSERGFDVCRIDGSVKLDERKRQIKEFNDVSSKFRIFLLSTRAGGLGINLTA
ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTALSVEGRILKRAFSKLKLEHV
VIGKGQFKQERSKPSMDVTEEEDLLSVLRDQDSEEDKLVQTDVSGEDLQRILDRSDLLIR
PPSGEDGDTESCVNVLPLKGPGWEVVIPTATGGMLSTLNS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgatgaaggagtgaaggacaggacagttgcggactctcctgtttccgtcctc
gaagatgaggatacctgcaaagaggacttggctgtcaaattagaggaagaagtaagtttg
gacccagaaaatggggatgccactcatatacctgaaaacatggcaaaggaggaagaaata
ttgataagagcacgggcaaaggaggaagaggaacagctgaataatctcaaggaagcgccc
atcttgaatgacactcaatttacgaagctggatgagcttcttacccagacacagctgtac
tctgagtttctactggagaagatggataacatcacaacaacgaacgtgaaggaagatgaa
gagaaaagcgttaaagaaaacaagaaaggccgtggcgcaaaacggaaggcaaccacaagc
tacaacaataacaaagccaaaagagctgttgctgccatgcttactagatctaaagaagat
gttcctattgaagatgcaacccttacggaggaagagagatttgagaaagagcaggcggaa
cttgtgcccttgctgactggtgggaagttgaagtcttatcaactgaaaggtgtcaagtgg
ttgatttcattatggcaaaatggattgaatggtattctagcagatcaaatgggacttgga
aagacaattcaaacaatagcttttcttgctcatttgaaggggaatgggttggatggtccc
tatttggtcattgctcccctgtctacactttcaaattggttgaatgaaatggaaaggttt
gtgccctcaatcaatgcaatcatctatcatggtgacaagaaacagagggatgagataagg
atgaagcacatgcctaggaccacaggtcccaactttcccattgtaattacgtcttatgaa
attgcaatgagtgacgcaaggaaatttttgaggcactacagttggaaatatcttgtggtg
gatgagggacataggctaaaaaactcgaaatgcaaactgatcaaagaattgaagctgttg
ccgattgaaaacaagcttctattaactggaacccctctgcagaataacttagctgagttg
tggtccttgttaaacttcattttacctgatatattctcatcccacgatgaatttgagtca
tggtttgatctgtcggggaagttcagcaatgaatctgaaaaagaagagatggaagaaaga
aggagagcacaagtggtggcaaaactccatgcaatattacgcccttttcttctacggagg
ctgaaagtggatgttgagcaaatgcttcctcgtaagaaggagataattttgtacgccacc
ctgactgattaccagaaaaagttccaggaacacctaattaataggacgctggagggctat
ttgattgagaatgtgtccactgggaatggatttaaaggaaagcttaataacttgatgatt
caacttcgcaagaattgcaaccatcctgacctcttggagtctatcttcaacggttctaat
ttttatccacctgtggaacaaatagttgagcaatgtggcaagtttcgcttgctggaccgg
ctgttatcaaagctttttgctcgcaaacacaaggttttgatattctctcagtggactaga
gtactagacctaatggactattattttagtgaaaggggattcgatgtttgtagaattgat
ggcagtgtgaaattggatgaaagaaaaagacagatcaaggagttcaatgatgttagcagc
aagttcaggatatttcttcttagcacaagagctggtggccttggtatcaatctcactgct
gctgatacctgtattttgtatgacagtgactggaatcctcaaatggatctgcaggcaatg
gatcggtgtcacagaattggtcagaccaaacctgttcatgtttacagactttcaacagct
ttgtctgtggagggtcgaatcctcaaaagagcttttagcaagttgaagcttgagcatgtg
gttattggaaaaggacaatttaagcaggaaaggagcaaaccttccatggatgttacagag
gaggaggatttgttgtctgtcttaagagatcaagacagtgaggaggacaagttggtgcag
acagatgtcagtggcgaagatctgcagaggattttagaccgtagtgatctacttatccgt
cctccttcaggtgaagatggagacactgaatcatgtgttaacgtccttcctctcaaagga
cctggttgggaagtagttattccaactgcaactggaggaatgctttctaccctcaacagc
tga
DBGET
integrated database retrieval system
