Solanum stenotomum: 125849374
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Entry
125849374 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125849374
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125849374
Membrane trafficking [BR:
sstn04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125849374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
125849374
NCBI-ProteinID:
XP_049385396
LinkDB
All DBs
Position
12:34040437..34045741
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AA seq
690 aa
AA seq
DB search
MEPHNNSDSNFATQGQVDPSSTSYSRVSNPLLQSDCSKFGDSTGLDDFEPVICSNIVKTG
KHEEYNRVAIHLMNEIPENTSSTSRLDTQAEELFSKQSFQDTREASERYHMDGWKEESEE
DSITLRQNNILRSSEKIISSNWDERGKCGSESFGQSAGHVNNDKSYIMGKPMGGQQETDH
DSPLCTKENYEKGAHTTNGMVKAEVSNVNLIQETNESDIKRNLLYPQLTENVECETQSSQ
NVDGSMCHQNQEKYFCYDSPLFGETGSWIPVSVPPMSESEHDEWSRGFCSNGRYLPEGDT
DWNQCMGEDKELTMWDVVLEMLLAARGKVHSLASGDIVGNMAWISSHLVEQAWKEMAQTL
TEANFGNTQEILEADPPKWLPDSASSTCMLCNVRFHPIMCSRHHCRFCGGLFCNECTKGR
SLLPEKFRTGEPQRVCDVCCVRLASVQPYLMDQVSRAAQLPTHDLTDLSTLRSWVNFPWG
QSMEHEIYKAANTIRGYEKIGLLSSEKKIPEAILQNARGLAILTVVKVGVMVTYNVGTGL
VIARREDGSWSPPSAISSFGVGWGAQAGGELTDFIIVLRTTDAVKTFGGDAHFSVGAGVS
AAAGIIGRTAEADLRAGTGGYATCYTYSCSKGAFVGCSLQGSVVTTRTRENSRFYGSQSI
KASEILLGSLPNPPAAAALYRALTDLYQKL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggagccccataacaattcggattctaattttgctactcaaggacaagtcgatccttct
tcaacttcttattctagggtttctaatccacttcttcaatcggactgtagtaagtttgga
gatagcacaggcctggatgattttgagccagtcatatgttcaaacattgtaaaaacgggt
aagcatgaagaatataacagagtagcgatacacctaatgaatgaaattcctgagaacaca
agttcgacgagtcgtctagatactcaagccgaggaacttttcagtaaacagtcatttcaa
gacactcgagaagctagtgagaggtatcatatggacggctggaaagaggaatctgaagaa
gattctataaccctgagacagaacaatatcttgaggagttctgagaagattatcagcagc
aactgggatgaaagaggaaaatgtggttccgaatcatttggtcaaagtgcaggtcatgta
aacaacgataagagttatatcatgggcaagcccatgggtggacagcaagaaactgatcat
gattcacctttgtgcacaaaagaaaactatgagaagggggcacacacaactaatggaatg
gttaaagctgaagtttctaatgttaatttaattcaagagactaacgaaagtgacataaaa
agaaaccttctttacccacaattaactgaaaatgtagaatgtgaaactcagtcatctcaa
aatgtagacggaagtatgtgccaccaaaatcaagaaaaatatttctgctacgattcacca
ctttttggtgaaactggatcttggatacctgtatcagttcctccaatgtcggagagtgag
catgatgagtggagtagaggcttctgctcaaatggaaggtaccttcccgaaggtgacaca
gattggaatcagtgcatgggggaagacaaggagttgacaatgtgggatgtggttctggaa
atgttactcgcagcacgaggaaaagtgcattctcttgcttctggtgatatagtaggcaac
atggcgtggatatcaagccatctcgttgagcaggcttggaaagagatggctcaaaccctc
acagaagctaattttggtaatacccaggaaattcttgaggcagatcctcctaaatggttg
cctgacagtgcatcttccacttgtatgttatgtaatgtgcggttccaccctatcatgtgt
agcaggcatcattgtagattttgtggaggattgttttgcaatgaatgtactaaaggaagg
agtttgctccctgaaaaatttcgcactggggaaccacaacgagtatgtgatgtatgttgt
gtacggcttgcgtctgtgcaaccatacctaatggatcaagtaagccgtgctgctcagttg
ccaacccatgacctcactgacttgagcacattgagatcctgggtaaacttcccgtgggga
cagtcaatggaacacgaaatttataaggccgctaacactattcggggatatgaaaagatt
ggtttattgagttctgagaagaaaattccagaagctattctacaaaatgcaagaggcctt
gccatacttacagtcgtgaaagttggagtgatggtaacctacaatgtcggaactggattg
gtgattgcacgtagagaagatggttcgtggtctcccccttcggccatttcttctttcggt
gtgggatggggtgctcaggctggtggagaacttactgacttcattattgtcctgagaact
actgatgctgtcaaaacttttggcggtgatgcacatttttcagttggagctggtgtgagt
gctgctgcggggatcattggacgaactgccgaagctgatcttcgtgccggtaccggtggc
tatgccacttgttatacatacagctgcagtaaaggtgcctttgttgggtgttccctacaa
gggagtgttgtgactacccgaacacgggaaaactccagattttatggtagccagtcaata
aaagcttcagaaattctccttggctcattgccaaatccccctgctgcagccgccctatat
cgtgcactcactgatttataccagaagctgtga
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