Solanum stenotomum: 125849385
Help
Entry
125849385 CDS
T08385
Name
(RefSeq) heat stress transcription factor A-4a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125849385
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
125849385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Csm1_N
SHE3
NOCA1_mid
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
125849385
NCBI-ProteinID:
XP_049385413
LinkDB
All DBs
Position
12:34058463..34062333
Genome browser
AA seq
408 aa
AA seq
DB search
MDEASCSTNALPPFLAKTYEMVDDPSCDAIVSWSSNNKSFIVWNPPHFARDLLPRYFKHN
NFSSFIRQLNTYGFRKIDPEKWEFANEGNFIRGQPHLLKNIHRRKPVHSHSAQNLHGLSS
PLTESERHGYKEDIQKLMHENGSLHLNLQRHKQDHQGLELQMQVLTERVQHAEHRQKTML
SALAQTLDKPVMDLSHMPQLQVNDRKRRFPGNSCLYNESDLEDTRGISSRALSRENMNPS
SLLTMNTELLDQLESSLTFWEDVLQDVDQAGIRQNCSLELDESTSCADSPAISYTQLNVD
VGPKTSGIDMNSEPNANTTPEIAEPEDKAAVAETATNVPTGVNDLFWEQFLTENPGSVDA
PEVHLERKDIGSKKNESKPVDSGKYWWNMKSVNSLAEQMGHLTPAEKT
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcttcgtgcagcacgaatgcactgcctccttttcttgcaaagacatatgaa
atggtggatgatccatcctgtgatgcaattgtctcctggagttcgaataataaaagcttc
attgtgtggaatcctccacattttgcaagggatttgttgcctagatacttcaagcacaat
aatttttccagctttatcagacagctaaacacttatggattcaggaaaattgaccctgaa
aaatgggaatttgcaaatgaaggtaatttcattagaggtcagccacaccttttgaagaat
atccatagacgtaaacctgttcacagtcattctgcacagaatcttcatggtctgtcatct
ccattaactgaatcagaaagacacggatacaaggaagatattcaaaagctgatgcatgag
aatggatcacttcacttgaatctacaaagacataagcaggatcaccaaggacttgaattg
caaatgcaggttttaactgaacgtgttcaacatgcagaacatcgtcagaagaccatgctc
tctgctttagctcaaaccttagataaaccagtaatggatttgagtcacatgccacaactt
caagtgaatgacagaaaaagaaggttcccaggaaatagctgcctttataatgaaagtgac
ctggaggatacgcgagggatatcatctagggctttgagtagggaaaatatgaacccgtcc
tctcttttgacaatgaacacagaactgttagatcaattggagtcttctttgactttttgg
gaggatgtgctacaagatgttgatcaagctgggatacgacagaattgttcactggagttg
gatgaatctacaagttgtgcagatagtcctgctatatcttacacacaactaaatgttgat
gttgggcctaagacttctggaattgacatgaattctgagcctaatgcaaacactactcct
gagattgctgaaccagaagacaaagcagctgtagcagagacggccactaatgtcccaaca
ggggttaatgatttattttgggaacagttcctaactgagaatcctggttcagttgatgct
cccgaagtacatttggaaaggaaagatattggcagcaaaaagaatgaaagcaaaccagtt
gacagtggaaaatattggtggaacatgaagagtgtaaatagcctggcagaacagatgggg
catcttactccagcagagaaaacttag
DBGET
integrated database retrieval system
