KEGG   Solanum stenotomum: 125849402
Entry
125849402         CDS       T08385                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
sstn  Solanum stenotomum
Pathway
sstn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125849402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125849402
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125849402
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     125849402
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125849402
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF4962 WAC_Acf1_DNA_bd HTH_IclR
Other DBs
NCBI-GeneID: 125849402
NCBI-ProteinID: XP_049385434
LinkDB
Position
12:complement(47933782..47947220)
AA seq 733 aa
MSAPKKKNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVSTMTAHLKEIAKHIESTQGGLFLEELNRIWAEHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDNIIHSSKIHKRLQDTLLELVQHERTGEVINRGLMRNV
IQMLMDLGSSVYQEDFEKPFLDVSADFYRLESQQYIECCDCGDYLKKAEKRLTEEIERVS
HYLDTKSEPKLTNVVEKEMIESHMHRLVHMENSGLVNMIVNDKYEDLGRMYNLFRRVSTG
LALIRDVMTSHIREIGKQLVTDPEKLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNA
LNSSFEFFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIILDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHA
AAGADLAEGPSLTVQVLTTGSWPTQSVNTCNLPSEILGVCDRFKTYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCILMLFNKADRMSYKEIEQATEIPASDLKRCLQS
LACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgcaccgaagaaaaaaaatttccagatagaggcatttaagcatcgggttgttgtg
gatccgaagtatgctgagaaaacttggaagatccttgaacatgcgattcatgagatttat
aatcataacgccagtggtctaagttttgaagagctctatagaaatgcatataacatggta
ctacacaaatttggggagaagctctattcaggacttgtgtcaactatgacagcacatttg
aaggaaattgcaaaacatattgaatctactcagggagggctgtttcttgaagaactgaat
cggatatgggcagagcataacaaggcactgcaaatgattcgagatatattgatgtatatg
gatagaactttcattcccagtacacataaaacacctgttcatgagcttggtttgaattta
tggagagacaacatcatccactctagcaaaatacacaaaaggcttcaggacacacttctt
gaactagttcaacatgagaggaccggtgaagtgataaacaggggtttgatgaggaatgta
atacaaatgctaatggatttaggttcttcagtataccaagaagactttgaaaagccgttt
cttgatgtctcggctgatttctatcggcttgagtctcagcaatacattgagtgctgtgat
tgtggggattatctgaagaaagctgagaaacgtcttaccgaagagattgaaagagtgtcc
cactatctagatacaaaaagtgaacccaaacttactaatgtcgtggagaaagagatgatt
gaaagccatatgcacaggctggttcatatggagaactcgggattagtgaatatgatcgta
aatgacaagtacgaagatttaggaaggatgtacaacttgttccgaagagtgtcaactggg
ctcgcactgattagagatgtcatgacttctcatattagagaaattggtaagcagcttgtc
actgatccagaaaagttgaaggatcctgtagactttgtgcagaggcttttggatgagaag
gataagcatgataagatcattagttcagcatttaacaatgacaaaacattccagaatgct
ctcaattcctcatttgagttcttcattaatctgaatccacgatcaccagagttcatctct
ttgtttgtggatgacaaacttcggaaagggctgaaaggggttactgaggaggatgtagag
atcatattagacaaagtgatgatgctcttccgctaccttcaggagaaagatgtgtttgag
aagtactacaagcagcacttggcaaagaggctactctcagggaagacggtatctgatgac
gcagagagaagtttgatagttaagcttaaaacagaatgcgggtaccagttcacctcaaaa
ctggaaggcatgtttactgatatgaagacttcacaggatacaatgcagggttttcatgct
gctgcgggtgctgatcttgcagagggtccttcacttactgtccaggttcttactactggg
tcctggccaacacaatctgttaatacttgcaatcttccttcggaaatcttaggggtctgt
gataggttcaagacatactatctggggacccatacgggtaggaggttgtcatggcagaca
aatatggggactgctgatctgaaagctacatttggaaagggacagaagcatgagcttaat
gtttccacttatcagatgtgcatccttatgttgtttaacaaagcggatcgaatgagttac
aaagaaattgaacaggctacggaaataccagcttcagacttaaagaggtgcttacaatct
ctcgcttgtgtcaaggggaagaatgttttgaggaaggagccaatgagcaaggatattgct
gaagatgatgccttttacttcaatgataaattctcgagcaagttctacaaggtgaagata
ggtactgttgttgcacaaaaggagtcagagcctgagaaacaggagactaggcagagagtg
gaggaggaccgaaaaccacagattgaggcagcaattgtcagaatcatgaaatctcggagg
gtgctagatcacaacaatatagttgccgaagtaacaaagcagctacagtctcgattcctg
ccaaaccctgttgtcataaagaaacgaattgagtctttgattgagcgtgaattcttggag
agggataaaaccgataggaagttgtatcgttatctggcttga

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