Solanum stenotomum: 125850378
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Entry
125850378 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125850378
00071 Fatty acid degradation
125850378
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125850378
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125850378
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125850378
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125850378
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125850378
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125850378
Exosomal proteins of breast cancer cells
125850378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
125850378
NCBI-ProteinID:
XP_049386193
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Position
1:14538242..14545172
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AA seq
660 aa
AA seq
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MEDQKKYVVEVEKAKEGRSNGRPSRGPVYRNVLAKDGFRPLSHSLQSCWDIFCESVRKFP
DNRMLGEREMSHGQAGKYIWLTYREVYDLVLKVGASMRVCGVKQGGKCGIYGANCSNWVI
SMQACNAHGLYCVPLYDTLGAGAVEYIICHAEVSVAFAEETKISEVLKAFPNAGKFLKSL
ISFGKVTQEQKDMAGNFDLKLYSWDEFLLLGMQEKFDFPAKKKTDICTIMYTSGTTGDPK
GVMISNESILSLISGVNHHMETVGEEFTDKDVYLSYLPLAHIFDRVIEELFISKGASVGF
WHKDVKQLIDDIKELKPTVFCSVPRVLDRIYSGLVEKISSAGFLKHKLFNFTYNYKLGNM
SKGYRHSEAAPIFDKIIFNKVKEGLGGNLRLILSGAAPLSSTVETYLRVVTCANVLQGYG
LTETCAGSFVARPDELAMVGTVGPPLPIIDVCLESVPEMGYDALGDTPRGEICIRGKCLF
SGYYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLEGIY
SLASSVDSIWIYGSSYESFLVAVVNPNMEALRSWANENGMTGDFDTICENPKAKTYILSE
LTSIAKEKKLKGFEFIKAVHLDPVPFDMERELITPTHKKKRAQFLKYYQNNIDTLYKSTR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaaaagaagtatgtagttgaagttgagaaagctaaagaaggaagatcaaat
ggaagaccatcaagaggccctgtttatcgtaatgtgttagccaaagatggtttcaggcca
ttatctcattcccttcaaagttgctgggatattttctgtgagtctgtcagaaaatttcca
gataaccgaatgttaggtgagcgggaaatgtcccacggtcaggcaggtaaatacatttgg
ttaacttatagggaggtgtatgatctagtgttaaaagttggagcttctatgcgtgtctgc
ggtgttaagcaaggtggaaaatgtggtatatacggggccaattgctccaactgggtaata
agcatgcaggcctgcaatgctcatggtctttattgcgtccccttatatgacactctaggt
gctggtgcagtagagtatatcatttgtcatgcagaagtttctgttgcttttgcggaggaa
actaaaatttctgaggtgctgaaagcttttcctaacgctggaaagttcctgaaaagtctc
ataagctttggtaaggtcacacaggaacagaaagacatggctggaaattttgatctgaag
ttatattcttgggatgaattcctgttgctgggaatgcaagagaaatttgattttccagct
aaaaagaagacagatatatgtacaatcatgtacacaagtggaacaactggtgacccaaag
ggagtcatgatttccaatgagagcattctatcccttatatctggagtgaaccaccatatg
gagaccgtgggtgaagagttcactgataaggatgtatatttatcgtaccttcctttagcg
cacatatttgatcgagtcattgaagaattattcatttctaaaggtgcctcagttggtttt
tggcataaggatgttaaacaattgattgatgacatcaaagagctaaagccaactgtattt
tgttcagttccgcgtgtgctggacaggatttattcaggtttggtggagaagatttcatct
gctggtttccttaaacacaaactgtttaattttacttataactacaaattgggtaacatg
agtaaagggtataggcactcagaggcagctcctatttttgacaaaataattttcaacaag
gtgaaggagggtttaggaggaaatttgcgtctcattctatcgggagcagctcctctctct
tccactgttgaaacctatttacgagttgtaacatgtgctaatgttcttcaaggatatggt
ttaacggagacctgtgcaggctcatttgttgcaagaccagatgaactggcaatggttggc
actgttggtcctcctttaccaattatagatgtgtgtctagagtctgttcctgaaatgggg
tacgacgcccttggagatacccctcgtggagagatatgcataagagggaagtgtttattc
tcaggatactataagcgtgaagacctcaccaaggaggtgttggttgatggatggttccac
acaggtgatgttggtgaatggcagccggatgggagcatgaaaattattgaccgcaagaaa
aacattttcaagctctcccaaggagaatatgttgcagttgagaatctggagggcatttat
tctcttgcctctagtgtggattcaatatggatctatggtagtagctatgagtcatttctt
gttgctgtcgtgaatcccaatatggaagctctgcgttcctgggccaatgagaatggaatg
actggggattttgatactatatgtgagaacccaaaggcaaaaacatatatcctatcagaa
ttaaccagtattgctaaggaaaaaaagctgaaaggctttgaatttatcaaagctgtgcac
cttgaccctgtaccatttgacatggagcgtgaacttataaccccgactcacaagaaaaag
agagcccagtttctcaaatactaccagaacaacattgatacactgtacaaaagcacaaga
taa
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