Solanum stenotomum: 125850504
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Entry
125850504 CDS
T08385
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125850504
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
125850504
Peptidases and inhibitors [BR:
sstn01002
]
Serine peptidases
Family S54: Rhomboid family
125850504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
DUF7374
Motif
Other DBs
NCBI-GeneID:
125850504
NCBI-ProteinID:
XP_049386310
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MAGGVHSQPEIQIQVHSRKGGNSVYPVEPATTTTASSGGPAFYREIKHFKKWFPWLIPSF
VIVNVVTFLVTMYVNNCPHNSVSCYAGFLGRFSFQPFSENPLLGPSSTTLEKMGALDVNK
VVREHQGWRLITCMWLHGGVFHLLANMLSLLVIGIRLEREFGFVRIGVLYIIAGLGGSLF
SALFIKSNISVGASGALFGLLGSMLSELIINWTIYANKIAVLVTLVVIIIINLAVGLLPH
VDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRYASRAYSTSAKPKFKMYQMVLWVVSLIL
LIIGFTGGLVMLFRGVDLNDHCSWCHYMSCLPTSRWSCNTEPVSCMSEQTSNQLTLTCSN
SNKTRTYSLSNPSTSKIQGLCTQLCR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggagttcattcacaaccggagatccaaatccaggtccattcaaggaaaggg
ggtaactcagtatacccagtagagccagctacgacaacaacagcatcatcaggaggacct
gctttttatagagaaattaagcatttcaagaaatggtttccatggttgataccatctttt
gttatagtcaatgtagtgacatttttggtgaccatgtatgtgaataactgcccccacaac
tctgtttcttgttatgctggattcttgggtagattttcatttcagcccttcagtgaaaat
cctcttcttgggccttcttctaccacgctagagaagatgggtgctctagatgtgaataag
gtggtccgcgaacatcaagggtggcgccttattacttgcatgtggttgcatggtggagtt
tttcatttactggccaacatgctgagtcttctagtgattggcattcggctggagcgagag
tttggatttgtacgcattggcgtgctctatatcatcgccggacttggtggcagtttgttc
tcagctctatttattaagtcaaatatatctgttggtgcttctggtgcactttttgggttg
ctgggaagcatgctttcagagctcataatcaattggaccatatatgccaataagattgca
gttttagtgacccttgtggtcatcattattataaatctggcagttggacttctcccgcac
gttgacaacttcgctcatattggaggatttgtgtctggttttcttcttggtttcgtattt
ctgatccggccccagtttggctgggtgagccagagatatgcatccagagcatattcaaca
tcggctaaaccgaaattcaagatgtatcaaatggttctatgggttgtttctcttattctt
ctgataattgggttcactggtggcttggtcatgcttttccgcggggtagatttaaatgat
cactgttcttggtgccattatatgagttgtctacccacatcaaggtggagctgcaacaca
gagcctgtttcctgtatgtccgagcaaacgagtaaccagctcacattgacatgctccaac
agtaacaagacaagaacatattcattgtcgaatccaagtacatctaagatccagggactg
tgtactcagctgtgccgttga
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