KEGG   Solanum stenotomum: 125850948
Entry
125850948         CDS       T08385                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
  KO
K10752  histone-binding protein RBBP4
Organism
sstn  Solanum stenotomum
Pathway
sstn03082  ATP-dependent chromatin remodeling
sstn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125850948
   03083 Polycomb repressive complex
    125850948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sstn03036]
    125850948
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     125850948
  Histone modification proteins
   HAT complexes
    HATB complex
     125850948
   HDAC complexes
    Sin3A-HDAC complex
     125850948
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     125850948
    PRC2.2
     125850948
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     125850948
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125850948
  Chromatin remodeling factors
   NuRD complex
    125850948
   NuRF complex
    125850948
   NuRF complex (fruit fly)
    125850948
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WD_LRWD1 Beta-prop_HPS5 MIOS_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 125850948
NCBI-ProteinID: XP_049386728
LinkDB
Position
1:863547..866732
AA seq 403 aa
MAEEEMEAAGETEQEVEEEFAVWKKNTPLLYDLVVCHALEWPSLTVQWLPFPTTDDGAFS
VHKLILGTHTSDDCPNFLMVANVHLPRNPASGLEHNLMKPQIPKVEIVHKIHVDGEVNRA
RCMPQKPAVVAAKTSSSEVYVFDSAKQPLDHEGGSCNPDVRLRGHDKEGYGLSWSPFKEG
FLLSGSNDQKICLWDVSALPQDKVLMAHHTYEEHEDVVEDVSWHPKNENLFGSVGDDCRL
IIWDLRTNKAQQSVLAHEKEVNYLSFNSYTEWVLATASSDSTVGLFDMRKLSSPLHVFGS
HTDEVFQVEWDPNHETVLASSGGDRRLMVWDLNRIGDEQLEGEAEDGPSELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNCVQVWQMAESIYREDNDNGNC
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcagaagaagaaatggaggcggcgggagaaaccgaacaagaggtagaagaggagttc
gccgtttggaagaagaacacgccgttgctctacgatcttgtcgtctgtcatgcccttgaa
tggccgtctctcaccgttcaatggcttccgttccccaccaccgacgacggtgctttttct
gtacacaagctcattctcggaactcacacctccgacgattgccccaacttcctcatggtc
gcaaatgttcatctccctcgtaatcctgcttcaggacttgaacacaatctcatgaagcct
caaatccctaaggtagagatagtacacaagattcatgttgatggagaagtgaatagggcg
agatgtatgccacagaagccagctgtagttgcagcaaagactagtagctctgaagtttat
gtctttgactcagctaaacaaccccttgatcatgaaggtgggtcttgtaaccctgatgtt
agacttcgagggcatgataaagaaggttatggcttgtcgtggagcccgtttaaagagggt
tttcttttgagtggttcaaatgatcagaagatttgtttgtgggatgtatctgcattgcct
caagataaagtgcttatggcccatcatacttatgaggagcatgaagatgtagttgaggac
gtgtcatggcatccaaagaatgagaacctatttggttcggtcggagatgattgtcgtctg
atcatttgggacttacggacaaacaaagcccaacagtcggttttagcgcatgagaaagag
gtgaattatttatctttcaactcatatactgagtgggttcttgctacagcatcgtcagat
agtactgttggtctgttcgacatgcgaaagcttagctctccattgcatgtgtttggcagt
catacggatgaggtattccaggtagaatgggatcctaatcatgagactgtactggcatct
tcaggtggtgatagaaggttgatggtctgggatcttaacaggattggtgacgagcaattg
gaaggggaagctgaagacgggccctccgaacttcttttctctcatggtggtcacaaagca
aaaatatctgatttttcatggaacaagaatgagccatgggtcatttcaagtgtagcagaa
gacaattgtgtccaagtctggcagatggctgagagcatctaccgtgaggacaatgacaat
ggcaactgctga

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