Solanum stenotomum: 125851038
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Entry
125851038 CDS
T08385
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125851038
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
125851038
NCBI-ProteinID:
XP_049386787
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIYAPEEEGHYYPGRVSRWWLKQSL
AYLNSSLKSLGTSLITKRSNDSISSLLEVVKSTGATQLFFNHLYDPISLVRDHRTKEILT
AQGISVRSFNADLLYEPWEVNDNEGRPFTTFSAFWEKCLSMPYDPEAPLLPPKRIISGDA
SRCPSDNLVFEDELEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT
SFLSPHLHFGEVSVRKVFHFVRIKQVLWANEGNKAAEESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNPQFVGYKCD
PHGEYVRRWLPELARLPTEWIHHPWNAPESVLEAAGIELGSNYPLPIVEIDSAKVRLEQA
LSEMWQNDAAARAAIENGMEEGHGDSADSPIAFPQAMHMEMDHEPVRNNPVIVTVRRYED
QMVPSMTSSLFRAEDEENSVDIRNSVVESRAEVPTDINVAEGHRRDTHDQTVMQTARTNA
TPHFNFAVGRRNSEDSTAESSSSTRERDGGVVPTWSPSSTNYSDQYVGDDNGIGTSSSYL
QRHPQSHQLMNWQRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgtagcatagtatggtttaggagggatctgagagtggaagataac
cctgctttggctgctggagttagagcaggggcagttattgctgtgtttatttatgctcct
gaagaagaagggcattattatcctggtagagtatcaagatggtggcttaagcagagcttg
gcttatcttaattcatctttgaagagtcttggaacttcccttattacaaagagatctaat
gatagtatttcttctcttcttgaagttgttaaatctactggtgctactcagctcttcttc
aatcatttgtatgatcctatttcacttgtgagagatcatcgcacaaaagaaatcttaaca
gctcaaggtatatctgtgcgttcctttaatgctgatttgctctatgaaccatgggaagtt
aatgacaatgaaggtcgcccgttcacgacattttctgctttttgggagaaatgccttagc
atgccttatgatccagaagctccacttcttcctcctaaaaggattatatctggtgatgca
tcaagatgcccttcagacaacttggtatttgaagatgaattagagaaaggaagcaatgca
cttcttgctcgggcatggtcacctggctggagtaatgctgataaagcactaactactttc
gttaatggaccattacttgagtactcgcagaaccgtcggaaagctgatagtgcaacaaca
tcctttctatctccacatttacattttggggaagtcagtgttcgtaaggtattccatttt
gttcgcatcaagcaagttctctgggccaatgaaggaaataaagctgctgaagagagtgtt
aatttgttccttaagtccattgggctgagggagtactcaagatacatgagttttaatcat
ccttatagccatgaaaggcccctgcttggtcacctaaggtacttcccatgggtagtggat
gagggctactttaaggcatggagacaaggtagaacaggttatcctttggttgatgctggt
atgagagagttatgggcaactggctggcttcatgatcgtatccgagtcgtggtttctagt
ttctttgtgaaggttctgcagcttccatggaggtggggaatgaagtatttttgggacaca
ttgttagatgcagatcttgagagtgatgctcttggttggcaatatatctctggtacccta
cctgatggtcgtgagcttgatcggattgataatccacagtttgtgggatacaagtgtgac
cctcatggggaatatgtccggcggtggcttcctgaacttgctaggctgcccaccgaatgg
atacaccacccatggaatgcaccagaatctgtacttgaagctgctggcattgagctgggt
tcgaattatcctcttccaatagttgaaattgattcagcaaaagttagactagaacaagcc
ctatcagaaatgtggcagaatgatgcagctgcaagagctgcgattgagaatggaatggaa
gaaggacatggtgactctgctgactccccaatagcatttcctcaggccatgcatatggaa
atggaccatgaaccagtcaggaacaaccccgtaatagttactgttcgacgctatgaagat
caaatggtgccaagcatgacgtcatctttgttcagagctgaagatgaagagaactctgtg
gacattaggaattcagttgtggaaagtagggcagaagttccaacagacatcaatgtagct
gaaggtcataggagagacactcatgaccaaaccgtcatgcaaactgctcgaaccaatgcc
accccacattttaattttgcggtaggtagaaggaactctgaagattcaacagcagaatct
tccagtagtactagagaaagggatgggggtgtagtgcctacatggtctccctcaagtacc
aactattcagaccaatatgttggtgatgataatggtattgggaccagttcatcttacttg
caaaggcatccacaatctcaccagctaatgaactggcagcggctttctcaaacagggtga
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