Solanum stenotomum: 125851264
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Entry
125851264 CDS
T08385
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125851264
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125851264
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Helicases
125851264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125851264
NCBI-ProteinID:
XP_049387006
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MASQISDKKRPKKTKKRSRVESVEFERINSLNWNPTLTEKDDDFSFLIGSNELEGGFLCL
EEIDESEYNLGIAKSTGGSEEKGKTKPKKQKVDTKNEELNGEAKGESKEEIEEVGKETKQ
KKKKKKKKKKDKINKDAVNEAEGNEESPAVTDGNDDQEQDSVDETEYYAWNELRLHPLLM
KSIYALKFKEPTPIQKACIPAGAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEQEKAER
QLPENGELDEKVASAGLLRALIITPTRELALQVTDHLKEAARHSNFRVVPIVGGMSSEKQ
ERLLKTRPEIVVGTPGRLWELMSGGDTHLVELHSLSFFVLDEADRMIENGHFHELQSIVD
MLPMASKSTDDDSQKSQNCETVSSVQRKKRQTFVFSATIALSADFRKKLKRGSQKSKAND
ELNSIETLSERAGMRADAAIIDLTNASILANKLEESFIDCREEDKDGYLYYILSVHGQGR
TIVFCTSIAALRHISSLLRILGVNVWTLHAQMQQRARLKAIDRFRGHEHGILIATDVAAR
GLDIPGVRTVIHYQLPHSAEVYVHRSGRTARAHSDGCSIALITPNDTSKFAALCKSFSKD
NFQRFPLEMSYMPEVMKRLSLACQIDKISRKDSQDKAKKNWLERSAELMELDLEDNDSEE
ERVNNHKRKKATSAQLTNLQEELKSLLSRPLQPKTFSKRYLAGAGVSPLLQNQLEELARQ
KNPNNSGDIRKKMIVIGQDCVEPLQALRSAGPETKLNLKDMAEKRRDITELRRKRKETKK
CLREQRRKQKKKLQGKE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaatttcagataagaagagaccaaagaagacaaagaaacgaagcagagtt
gaatcagtggaatttgagcgaatcaactcacttaattggaacccaacacttacagagaaa
gatgatgatttctccttccttattggctccaacgagcttgaaggaggttttttatgtctt
gaagagatcgatgaatcagagtacaatttgggtattgccaaatcaactgggggaagtgaa
gaaaaggggaagacaaaaccaaagaaacagaaagtagataccaaaaatgaggaattgaat
ggtgaagctaagggtgagagcaaagaggagattgaggaggtgggaaaggaaacgaaacaa
aagaagaaaaagaagaagaagaaaaagaaagataagatcaataaagatgctgtaaatgaa
gctgaaggaaatgaagagtcaccagctgtcactgatggaaatgatgatcaagaacaagat
tcagtagatgaaactgaatattatgcatggaatgaactgagacttcatccactgctcatg
aaatcgatatacgcgcttaagttcaaagaacctacaccaatacagaaagcatgcattcct
gcaggtgctcaccaaggaaaggatgttgtgggtgctgcagagacaggttcagggaaaaca
ctggcatttggtctgcccattcttcaacgtctgcttgaggagcaagaaaaggccgaaagg
cagcttccagaaaatggagaattggatgaaaaagttgcctcggcaggtctcctccgcgct
ctaattattactcccacaagagagcttgcccttcaggtcactgatcatctgaaggaagca
gcaagacattccaattttagggttgtccctattgttggtggaatgtcaagtgaaaaacaa
gaaagacttttgaaaacaaggcctgaaattgttgtcggaactccggggaggctttgggag
cttatgtctggtggtgatactcatctcgtggagttgcactcactgtcattttttgtgctg
gatgaggccgatcggatgatagaaaatggccatttccacgagttgcagtctatagttgac
atgcttcccatggctagtaaatcaactgatgacgattctcagaaatcacaaaattgtgaa
acagtttccagtgtccaaagaaagaaaaggcaaacatttgtgttttctgcaaccattgct
ttgtctgccgatttcaggaagaagctaaagcgcggatcacaaaaatcaaaagcaaacgat
gagttgaattcaatagaaactctgtctgagagagcaggaatgagggcagatgcggcaatc
attgatctgactaatgcatcaattctagccaacaagctcgaggagtcgtttatagactgc
agggaagaagataaagatgggtatttgtattacattttgagtgttcatggacaaggtcgg
acaattgttttctgtacgtccattgcagctttacgccatatttcctccctcttgcgcatc
cttggcgtcaatgtctggacacttcatgcccagatgcagcagagagctcgacttaaggca
attgaccggtttcggggacatgagcatggtatactcattgctacagatgttgcagccaga
ggtttggatattcctggtgttcgaactgtcattcactatcagctacctcattcagctgaa
gtttacgttcatagaagtggaagaactgccagggctcattctgatgggtgtagcattgct
ctaatcacaccaaatgatacctcaaagtttgctgctttatgcaagtcattttcaaaggat
aacttccagcggtttcctttagaaatgtcatacatgcctgaagttatgaagcgattatcc
cttgcatgtcaaatagacaagatttcgcgaaaggactctcaggacaaggccaagaaaaat
tggcttgagcgaagtgctgaattaatggaactagatttggaagataatgatagtgaggag
gaaagagtgaacaatcataagcgaaagaaagccacgtctgctcaactaaccaatctacaa
gaggaactaaaaagtcttctttcacggccattgcaacccaaaacattctcaaaacgctac
ttggctggggctggtgtttcacctctccttcagaaccagctggaggaattagctaggcag
aaaaacccaaataattccggagatataaggaagaaaatgattgtcattggtcaggattgc
gtcgagcccctccaggcacttaggagtgctggtccagagactaagttgaatctgaaggat
atggctgaaaagcggagagatataaccgagttaaggagaaagaggaaagaaaccaaaaaa
tgtttgcgtgaacaacgacgaaaacagaagaaaaaacttcaaggaaaagagtga
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