Solanum stenotomum: 125851578
Help
Entry
125851578 CDS
T08385
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125851578
Membrane trafficking [BR:
sstn04131
]
Autophagy
Other autophagy associated proteins
Others
125851578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
125851578
NCBI-ProteinID:
XP_049387311
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MATVSPLTPPVKHSNTSLSPILQPRLEQLDEQHKQQVQTQEAAVVQIDNDPKQSPLNPCP
THGFINKAISTLYRVSFNQNGSCFAIGTDCGISVYSCDPYCEMFRRYFDNGGGIGIVEML
FRSNILVFVGNGDNPQYHRNKVIIWDDHQNRSIGELRFRSAVRGVRLRRDCIVVILEQKI
FIYNFADLKLVHQIETISNPKGLCEISQTAVSPVLVCPGLQNGQVRVDHFTPKRTKFIFA
HDSRIASFALSHEGNVLATASIKGTLIRIFSTQDGTLLQEVRRGADRAEIHSVSFDPTAQ
WLAVSSDKGTVHVFRLKVNLGNQDKTRTTPNFRGTLAAVSSPLSFIKGVLPKYFSSEWSV
AQFRFPGDSEFIVTFGHEKNTLLILGLDGSFIRCKFDPSSGKEMTQMEIHNFLKSEKAS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtttcccctctcaccccaccagttaagcactctaatactagtttgtcacca
atacttcaacctcgcttagagcaactagatgaacaacacaaacaacaggttcagacacaa
gaagctgctgtggtacagatagataatgatcctaagcagagtccccttaatccatgtcct
acccatggctttatcaataaagcaatttcaactctataccgtgtttccttcaatcaaaat
ggtagttgtttcgccattggcactgattgcggcattagtgtctatagttgtgacccttac
tgtgagatgtttcgacgatactttgataatggaggtggtattggaattgttgagatgctc
ttcagaagcaatatactagtctttgtgggaaatggagataatccacagtatcatcgaaac
aaggtcataatttgggatgaccatcagaaccgtagcatcggagagctccgtttcaggtcg
gctgtgcgcggtgtgcggcttcgacgggactgcattgtagttatacttgagcagaagata
tttatatataattttgctgatctgaagctcgtccaccagattgagacaatttcaaaccca
aaaggactctgtgaaatttcacaaacagctgtatcacctgtgctggtgtgccctgggttg
caaaatggtcaagttcgggttgatcatttcacaccaaaaaggactaagtttatctttgca
catgattctaggattgcatcttttgctcttagtcatgaggggaatgtgctggcaacagca
agtatcaagggtactcttatccggattttcagcacgcaggatggtacattgttacaggag
gtaaggagaggtgctgatagagcagaaattcacagtgtttcattcgatccaactgctcag
tggctagcagtctctagtgacaaaggcacagttcatgtttttaggcttaaggtcaatcta
gggaatcaggataagacaagaactactcctaatttccgtggtactttggctgcagtgagt
tcaccactatccttcatcaaaggagtacttccaaagtattttagctcagaatggtctgtg
gctcaattcagatttcccggagattccgagttcattgttacttttggtcatgaaaagaat
acattgttaattcttggcttggatggaagctttattagatgcaagtttgatccgtcctct
ggcaaagagatgactcagatggagattcacaactttctgaagtccgaaaaggcctcgtga
DBGET
integrated database retrieval system
