Solanum stenotomum: 125851930
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Entry
125851930 CDS
T08385
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125851930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125851930
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125851930
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125851930
NCBI-ProteinID:
XP_049387632
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Position
1:complement(15841021..15842388)
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AA seq
455 aa
AA seq
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MATRAASFLADLDDLSDNEETPSWIEEHDGELDDIFKLQNSYCYINVMHRVEDALSCDRK
PILGDSEYDALIIDCNALSIDIENEIFIIHNFIRDKYRLKFPELESLVNHPIDYARVVKK
IGNAMDMTLVDLEGLLPSAVIMVVSVTASTTSGKPLPQDVLHKTLEACDRALSIDSAKKK
VLDFVESRMGFIAPNLSAVVGCAVAAKLIATAGGLSSLANIPADCIKLLGAKRNINNLAG
FSTAKFHHIGGCYIEETDIIQSTPPSLRKQAYGLLADKSTLAARMDSARGDLTGQYGTSL
KGIILEKMEKLQELPPAKQPKPLPVPLNSNGYTKKRGGSRKRKMNKRYEITERQKLVNRI
KFGVAEESSLGDGLGQGYGMLSQADGIGKLRLSVIKKKFKSSSTSTRVYSGLTSSLAFTP
VQGIELSNPDQAKHATRSRSTYFSETATFSKIKTT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctactcgtgctgcttctttcttagcagatctggacgacttgtcggataacgaagaa
actccatcatggatagaagagcatgatggagaattggatgatattttcaaactgcaaaat
tcatattgctacattaacgttatgcacagagttgaagatgccctaagttgtgatcgtaag
cctatattaggtgattcagaatatgatgctttgataatagactgtaatgcattatcaatc
gatattgagaatgaaatttttataatccacaattttatacgcgacaagtaccgattgaaa
tttcctgaattggagtcacttgttaatcacccaattgattatgctcgggttgttaaaaag
attgggaatgcaatggacatgaccttagttgatttggaaggattattaccctcagctgtt
atcatggttgtctctgttaccgcgtctactaccagtggcaagccattgccacaagacgtt
ttacacaagacgttggaagcatgtgacagagctctttctattgattcagcaaagaaaaaa
gtacttgattttgttgagagtcgaatgggatttatcgctcccaatctttctgctgttgtt
gggtgtgcagttgctgctaaacttatagctactgctggtggtctctcgtccttggcaaac
atccccgctgattgcatcaagcttcttggtgccaaaaggaatattaataatttagcaggg
ttctcaacagccaagtttcatcacataggaggttgttatattgaggaaactgatataatt
cagagtacacctccttccttaaggaagcaagcctatggactgttggcagataaatctaca
ttagcagcccgtatggactcagccagaggagatctgactggtcaatatggaacatctctt
aagggtattattcttgagaagatggagaaattgcaagagttacctccagcaaagcaacca
aagcctcttccagttccattaaattctaatggttatacgaaaaagagaggcggtagtcgg
aagagaaagatgaataagagatatgagatcacggagaggcagaagctagtaaataggatc
aagtttggagtagctgaagagagctctttaggagatggattagggcagggctatggcatg
cttagtcaagcagatggaattggcaagttacgtctatcagttattaagaaaaaattcaaa
agcagcagtactagtactcgtgtatactcaggcttgacttcaagtttggccttcacccca
gttcaagggatcgagctatcaaatcctgatcaggcgaagcatgcaaccagaagtcgtagc
acctatttctctgaaactgcaacattttccaagattaagacaacatga
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