Solanum stenotomum: 125852450
Help
Entry
125852450 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00450
Selenocompound metabolism
sstn00970
Aminoacyl-tRNA biosynthesis
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125852450
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125852450
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125852450
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125852450
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
125852450
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125852450
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125852450
Prokaryotic type
Other AARSs
125852450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
125852450
NCBI-ProteinID:
XP_049388134
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MGDDRKATPKVPIEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRIRGYNAIY
MCGTDEYGTATETKALEENCHPKDICDKYHAIHKEVYKWFDISFDEFGRTSTPQQTEICQ
AIFKKLWENDSLSENTMQQLYCNTCKRFLADRLVEGNCPGCNYDSARGDQCDECGKLLNP
TELIEPRCKVCCNTPCIRDTDHLFLELPLLKDQLEAYIVRSIYQDTSGGWSQNAIRITDA
WFKDGLNPRCITRDLKWGVPVPHEKYKDKVFYVWYDAPIGYVSITSCYTTEWEKWWKNPD
NVELYQFMGKDNVSFHTVLFPSALLGTGESWTLLKTISATEYLNYEAGKFSKSKGVGVFG
NDVKDTNIPVEVWRYYLLTNRPEVSDSLFLWADLQVKLNSELLSNLGNFVNRVLSFIAKD
PDSGYGSIIPNAEGAESHSLTKALGEKVRSCVQQYVEAMEKVKLKQGLKVAMSISSEGNG
YLQASQFWKLYKEDRPSCSIVMRTACGLLYLLACLLEPFMPSFSREVLKQLNMPPETQVS
LSDEGGDIENGKRPWDILPAGHKIGTPAPLFKELKDEEVEFYRNKFAGSQADRADTALKA
ETEAKEMAKQLKKAKISDGNKKKERATKSSETKSKAPASVEGDISISRLDIRVGLVTKAQ
KHPDADSLYVEEIDVGEALPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPVSMRGIKSQAM
VLATSNSDHTKVELVEPPKDAVIGERVTFPGFDGKPDNILNPKKKVWETVQVDLHTNKEL
VACYKDVPFTTSVGICKVASISEGTIR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgatcgtaaggcgactccgaaagttccaatcgaaggcaaaagaaacatccta
attactagtgctttgccttacgtcaacaacgttcctcatcttggcaacatcatcggatgt
gtgttgagtgcggatgtgtttgcgaggtactgtaggattagaggatacaatgcaatatat
atgtgtggtacagatgagtatgggacggcaactgagactaaagctttggaggaaaattgt
catccaaaggatatttgcgacaaatatcatgcaattcacaaagaagtttataaatggttt
gatataagctttgatgaatttggacgcacatcaacaccacaacagacagaaatttgtcaa
gcaattttcaagaagctctgggaaaatgattccctttctgagaatacaatgcagcagctt
tactgcaacacctgcaaaaggttcttagcagatagacttgtagagggaaactgtccaggt
tgcaactatgattctgcacgaggagatcaatgcgatgagtgtgggaaactattaaatccc
acagaactaatagagccaagatgcaaggtttgttgcaacactccttgtatccgagataca
gatcatttgtttcttgagctccctttgttgaaggatcagttagaagcatatatagttaga
agcatatatcaagacacgtccgggggatggagtcagaatgctatccgtataacagatgcg
tggtttaaagatggacttaatccaaggtgtataactagagatttgaaatggggagttcca
gtaccacatgaaaaatacaaggataaggttttctatgtatggtatgatgctcctattgga
tatgtatcaatcacctcatgctacacaactgagtgggagaagtggtggaagaatccagat
aatgtggagctgtatcagtttatgggcaaggacaatgtgtcttttcacactgtattattc
ccatctgcgcttcttggaactggtgaaagctggacacttctgaaaactatcagtgcaacg
gagtacttgaactatgaagcaggaaaattctcaaagagcaagggtgtaggagtttttggt
aatgatgtaaaagatacaaatattcctgtagaagtatggagatattacctgctaacaaac
aggccagaggtctcagactctttgtttttgtgggcagacctacaagtgaagttaaacagt
gagttgctaagcaacttaggcaattttgttaatagagtcctgagtttcatcgcaaaagat
ccagactcaggttatggttctattattcccaacgctgaaggagcagaatcgcattccttg
acaaaggcattgggtgaaaaagttagaagttgtgttcagcaatatgtagaagccatggag
aaggttaaattgaagcagggcttgaaggtcgctatgtctatttctagtgaaggaaacggt
tatctgcaggcgagccaattttggaagctttacaaggaagacaggccttcctgttcgata
gtgatgagaactgcttgtggtctactatatcttctagcatgtcttttagagccatttatg
ccatctttttcacgagaggtgcttaagcagctcaacatgcctcctgaaacacaagtttca
ctgtctgatgaaggaggtgacattgaaaatggcaaaagaccatgggatattctacctgca
ggtcacaaaattggaacaccagcaccattgttcaaagagctgaaagatgaagaagttgaa
ttctacagaaataagtttgctggaagtcaggcagatagggcagatacggctctgaaggca
gaaactgaggccaaagagatggctaaacaattgaagaaagcaaaaatatcagatggtaat
aagaagaaggaacgtgcaacaaaatcttctgaaaccaaatctaaggccccagcctctgtt
gaaggagacatttccattagtagactcgacattcgtgttggcctcgtaaccaaagcgcag
aaacatcctgatgctgattcattgtacgtggaagagattgatgttggtgaagctctgccc
agaactgttgttagtggccttgtaaaatatattccacttgaggagatgcagaatcggaag
gtctgtgttctatgcaacctaaaaccagttagcatgagggggataaagtcccaggcaatg
gttcttgccacttctaatagtgatcacactaaggttgaattggtcgagccaccaaaagat
gctgtgattggggaacgagttacattccccggatttgatggcaaacctgacaatatcttg
aaccctaagaagaaagtttgggagactgttcaggtggatttacataccaataaggagtta
gttgcctgctacaaagatgtgccattcaccacatcagttggtatttgcaaggttgcttcc
atttctgaaggaacaataaggtag
DBGET
integrated database retrieval system
