Solanum stenotomum: 125852460
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Entry
125852460 CDS
T08385
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125852460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125852460
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125852460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_28
AAA_25
AAA_33
RsgA_GTPase
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
125852460
NCBI-ProteinID:
XP_049388141
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MEPVNLNSMRGSSMRGSMRGSLRASTSNSIWRNNGVDAFSRSARDEDDEEALKWAALEKL
PTFDRLRKGLLFGSQGAANEIDVNDLGFQERKNLLERLVKVADEDNEKFLMKLKNRIDRV
GIDMPSIEVRYEHLNIEADAYAGSRALPTFLNFMTNFVESLLNSLHILPSKKRQITILKD
VSGMIKPCRMTLLLGPPSSGKTTLLLALAGKLDPALKVTGNVTYNGHELHEFVPQRTAVY
ISQHDLHIGEMTVRETLEFSARCQGVGSRFEMLAELSRREKAANIKPDPDIDIYMKAAAT
EGQEANVVTDYVLKILGLDICADTMVGDEMIRGISGGQKKRVTTGEMLVGPSKALFMDEI
STGLDSSTTFSIVNSLRQTVQLLKGTAVISLLQPAPETYNLFDDIILLSDGYIVYQGPRE
AVLDFFESMGFKCPDRKGAADFLQEVTSKKDQQQYWAKRNEPYRFVTSKEFAEAYQSFHV
GRKLSDELATPYDKTKSHPAALSTKKYGIGTKQLLKVCAEREFLLMKRNSFVYIFKLSQL
AIMALITMSVFFRTKLPRDDMDDGGIYAGALFFVVVMIMFNGMAEIALTIFKLPVYFKQR
DLLFYPSWAYALPTWILKIPITFVECGMWTFLTYYVMGFDPNVSRLFKQFLLLVLVHQMA
SALFRFIGAVGRTMGVASTFGAFALLLQFALGGFVLAREDVKKWWIWGYWTSPLMYSVNS
ILVNEFDGKNWKHIAPNGTEPLGAAVIRSRGFFPDAYWYWIGCGALLGFTMIFNFFYSIA
LAYLDPFGKPQAMISEDGENADNVELRERSETEGQEKKKGMVLPFEPHSITFDNVVYSVD
MPQEMKEQGSAEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGD
IKISGYPKKQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLPQDVDENKRKMFVDEV
MELVELAPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV
MRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLIKYFES
LPGVSKIKEAYNPATWMLEVTASSQEMMLGVDFADLYKNSDLYRRNKALIAELSTPRPGT
KDLHFETQFSQPFWTQCMACLWKQHWSYWRNPAYTAVRFIFTTFIALVFGTMFWDLGTKV
SRSQDLINAMGSMYAATLFLGVQNSSSVQPVVAVERTVFYREKAAGMYSAIPYAFGQVVI
EIPYVFVQSAVYGVIVYAMIGFEWTAVKFLWYFFFMYCTLLYFTFYGMMTVAVTPNQNVA
SIVAAFFYAVWNLFSGFIVPRPRIPIWWRWYYWACPVAWTLYGLVASQFGDIQTPLTNDE
NVEQFLRRYFGFKHDFLGVVAAVIAALPIMFALTFALGIKAFNFQRR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggagccggtaaatctcaatagtatgagaggtagtagtatgagaggaagtatgagaggt
agtttaagagcaagtactagtaattcaatatggagaaacaatggtgttgacgcattttcg
cgatcagcgagagatgaagatgatgaagaagcacttaaatgggctgcattagaaaaattg
ccaacgttcgatcgattgaggaaaggtttattgtttggatcacaaggtgcagctaatgaa
attgatgtaaatgatcttggatttcaagaaaggaagaatttacttgagagacttgttaaa
gttgctgatgaagataatgaaaagttcttgatgaaactcaagaatagaattgatagagtt
gggattgatatgccatcaatagaagtgagatatgaacatctaaatattgaggcagatgca
tatgcaggaagtagagctctgcctacttttttgaacttcatgaccaactttgttgagtca
ttgttgaattctcttcacatccttccaagtaaaaagaggcaaataacaattctcaaagat
gtaagtggtatgattaagccttgtagaatgactctacttttgggacctccgagttctgga
aagactactttgttattagcattggctggaaaacttgatcctgctttaaaggttactggt
aatgtgacttataatggacatgaactacatgaatttgtgccacaaagaacagctgtttat
atcagtcaacatgacttgcatattggagaaatgactgttagggaaactttggaattttct
gcaagatgccaaggagttggctctagatttgagatgttggctgaactgtcaagaagggag
aaagcagctaatatcaaaccagatcctgatattgatatctacatgaaggctgcagcaaca
gaaggacaagaagccaatgttgttacagattatgttcttaagatattgggacttgacatt
tgtgctgatactatggtgggagatgaaatgataaggggtatttccggggggcaaaagaaa
cgtgtaacaacgggtgaaatgcttgttggaccatcaaaggcacttttcatggatgaaatc
tcaactggattggatagttcaactactttctccattgttaactctctaagacaaacggtg
caactcttgaagggaactgctgtgatatctctgttgcagccagcccccgagacttacaac
ctgtttgatgacattattttgttgtcagacgggtacattgtctatcagggtcctcgagaa
gctgttcttgacttctttgagtccatgggattcaaatgccccgacagaaaaggtgcagca
gatttcttgcaagaggtaacatcaaagaaggatcaacaacaatattgggctaagaggaat
gagccttataggtttgtcacatcaaaagaatttgccgaggcatatcagtctttccatgtt
ggaaggaaactcagcgatgagcttgcaactccatatgacaagaccaaaagccaccctgct
gctttgtctactaagaagtatggtatagggacgaaacaactgttgaaggtctgcgctgaa
cgagaattcctactaatgaagaggaactcatttgtttacatattcaagctctctcagctt
gctataatggcacttataacgatgagtgtctttttccgaactaagcttccccgagatgat
atggatgatggaggaatatatgctggtgctctctttttcgtggtcgttatgattatgttt
aatggaatggctgagattgccctgacaattttcaagcttccggtctacttcaagcaaagg
gaccttcttttttatccttcatgggcttatgcccttccgacatggattctcaaaatccct
ataacatttgttgagtgtggaatgtggacattccttacatattatgtcatgggatttgat
ccaaatgtttcaagactgttcaaacaattcttgcttctcgtactagtacaccagatggca
tcagcattgttcagattcattggagcagtggggagaacaatgggagtagctagcacattt
ggagcatttgctcttcttttacaatttgcactaggaggatttgtccttgcacgagaggat
gtgaagaaatggtggatttggggttactggacctcaccactgatgtattccgtgaattca
attctcgtgaatgaatttgatggaaagaattggaaacatatagcgccaaatggaaccgag
ccccttggagctgcagtcataagatctaggggattctttccagatgcatactggtactgg
ataggttgtggggcacttctcggattcacaatgatcttcaacttcttctacagtattgca
ctcgcttaccttgacccatttggtaagccacaagctatgatatcagaagacggtgagaat
gctgataatgttgaactcagggagagaagtgaaaccgagggtcaggaaaagaagaaggga
atggttcttccatttgaaccccattccatcactttcgataacgttgtatactctgttgac
atgcctcaggaaatgaaggaacaaggttctgctgaagatagattggtacttctaaagggt
gtaagtggagctttcaggccaggtgttctcacagctttgatgggtgttagtggagccggt
aaaacaacattgatggatgtgttggccggaaggaaaacaggaggatacattgatggtgac
atcaagatttctggatatccaaagaagcaagaaacgtttgcacgtatttctggatactgt
gagcaaaatgacatccattcgccttatgttacagtttatgagtccttggtttactcagct
tggctgcgtttacctcaagatgttgacgaaaataagagaaagatgtttgttgacgaagtt
atggaacttgtggagctagctccattaagatcagccttagttggactccctggagtcaat
ggtctatcaaccgagcaacgcaaaaggctgacaattgcggttgagctggtagcaaacccc
tctatcattttcatggatgaaccaacttcagggttggatgcaagagctgctgctattgta
atgagagctgttaggaacactgtcgatacaggaagaaccgttgtctgtaccattcatcag
cctagcatcgacatttttgaagcctttgatgagctatttctaatgaaacgcggaggccag
gagatatatgttggtcctctaggtcgccattcttgccatttgatcaaatactttgagtca
ttgcctggagttagtaagataaaagaggcttacaatcccgcaacttggatgttagaagtc
accgcctcatctcaagaaatgatgttaggggttgattttgctgatttatacaagaattcc
gacctctacaggaggaacaaagccttgattgctgaattaagtacgcctcgtcctggtaca
aaggatctacattttgaaactcaattttcacagcctttctggacccaatgtatggcttgt
ctctggaagcaacactggtcgtattggcgtaatccagcttatactgcagttagattcatt
ttcacaacattcatagcacttgtctttggcacaatgttttgggatcttggtaccaaagtg
agtcggagtcaggatcttatcaacgctatgggatctatgtatgctgcaactctcttcctt
ggtgtacaaaattcatcatcagtccagcctgttgttgccgttgagcgaactgtattttac
agagaaaaagctgctggaatgtattctgccataccttacgcctttggacaggttgtcatc
gaaataccttatgtatttgtacaatcggctgtctatggtgtcatcgtgtatgcaatgatc
gggtttgaatggactgctgtcaaattcttatggtacttcttcttcatgtactgcaccctc
ttgtacttcaccttctatggcatgatgaccgtggctgttacccccaaccaaaacgttgca
tccattgtcgcggccttcttctatgcagtatggaatctcttctcaggattcatcgttcca
cgacctcgcattccaatatggtggagatggtactactgggcttgccctgttgcatggacc
ttgtatggtcttgttgcatcacaattcggagacatccaaactcctctcaccaatgatgaa
aatgttgaacaattcttgagacgttacttcggatttaagcatgattttcttggcgttgtt
gctgctgtcatcgccgcgttgcctattatgtttgccttgacatttgcattaggcattaag
gcattcaacttccagagaagataa
DBGET
integrated database retrieval system
