Solanum stenotomum: 125852495
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Entry
125852495 CDS
T08385
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125852495
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125852495
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125852495
03036 Chromosome and associated proteins [BR:
sstn03036
]
125852495
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125852495
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125852495
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125852495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DYN_lid
Motif
Other DBs
NCBI-GeneID:
125852495
NCBI-ProteinID:
XP_049388174
LinkDB
All DBs
Position
1:685843..687392
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AA seq
447 aa
AA seq
DB search
MGGLNGNSPRASPRKTFSPKNSPRKTNTTLKQLLLDSRNMTSSLDSETEELLSLISYCSF
TYTFTDPQESPSQQDLKRLKLIQLLSIIKTLIKPLDDDQLLSPLFIMLSSNLFRPLPPSI
HSVVSVLPDDDDLVSNPTPSWPHLQIVYDIFLRIVSRTCVESLRIYIDHAFLLSLLALFQ
SEDQRERDNLKNVFHRIYSKLTFYRPFMRKTMHDVFLHYVFETDQRHPGIGELLEIWGTI
INGFSVPLKEEHKFFLNRVLVPLHKPKGMQVYHRQLAYCVSQFVQKEPELGEVVIRGILK
YWPITNCQKEVLFIGELEELVETVDPQLYKELALPLCTKITKCLNSWNSQVAERALYVWN
NEQFWKMASQAMEQVFPVLVEGMEKNLQGHWSKSVRQLTENVKGMLEALAPFLYSKCLLQ
LEIQEAGERIEEMRRKEIWEKIENAAM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggttaaatggaaacagcccaagagcctctccaaggaaaacatttagcccaaaa
aactctccaagaaaaacaaacacaactctaaaacaactccttttagattcaaggaacatg
acaagttctcttgattctgagacagaggaattgctttctctaatatcttactgttctttc
acatacactttcactgatccacaagaatctccttcacaacaagatttaaagaggctaaaa
ctcatccaactcctttccatcatcaagactctcataaaaccacttgatgatgatcaacta
ctttcaccccttttcataatgttgtcatctaatctttttaggccactccctccatcaatt
cattctgtcgtctcagtattaccagatgacgatgatcttgtcagcaatccaacaccctcc
tggccacacttgcaaatcgtttacgacattttcctcaggattgttagtagaacatgtgtt
gaatccctccgtatctacatagaccacgctttcctccttagtctcctcgcgttgttccaa
tctgaagatcaaagagaacgcgacaacttgaagaatgtgttccacagaatctattcaaag
ttaacattctacagaccattcatgagaaagactatgcatgatgtattcttgcactatgtt
ttcgagactgatcaaaggcaccctggaattggagagcttcttgaaatatggggcacaatt
ataaatggatttagtgttcctttgaaagaagaacacaagtttttcttgaatagagttctt
gtccctttgcataaaccaaaagggatgcaagtttatcataggcagttggcttattgtgta
tctcagtttgtgcaaaaagagcctgagcttggtgaggttgttataagaggcatattgaag
tactggcctattacaaattgccagaaggaagttctgtttattggtgaattggaagaactt
gtggagactgttgatccacaattgtacaaggaacttgccctgccattgtgcaccaaaatt
accaagtgtttaaacagttggaactcgcaggttgctgaacgcgcattgtatgtgtggaac
aatgagcaattctggaagatggcatcacaagcaatggaacaagtctttccagttctagtg
gaagggatggagaagaatttgcaaggacattggagcaaaagtgttcgacaattgacagag
aatgtgaagggaatgctggaagctcttgcaccatttctctattccaagtgccttctacag
cttgaaatccaagaagccggtgaacgcatagaagagatgagaagaaaagaaatttgggaa
aaaattgaaaatgcagcaatgtaa
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