Solanum stenotomum: 125852659
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Entry
125852659 CDS
T08385
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
sstn
Solanum stenotomum
Pathway
sstn03420
Nucleotide excision repair
sstn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125852659
09124 Replication and repair
03420 Nucleotide excision repair
125852659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sstn03051
]
125852659
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125852659
Proteasome [BR:
sstn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125852659
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125852659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
Rad60-SLD_2
CUE
Dsc3_N
TECR_N
UBA_3
Ubiquitin_2
Ubiquitin_4
NQRA_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
125852659
NCBI-ProteinID:
XP_049388335
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAESNFIVIMLTKSKSSSGGGSGTSTAATAKTPQSSTAAPSSTPASTAAQVPVASPA
AAPSPAPASAPAPAPAPAPAPSPAPAPASTVVPGSDVYGQAASSLVAGNNLDGAIQQILD
MGGGTWDRETVVRALRAAFNNPERAVEYLYSGIPEAAEVPPVGGSPPSVQAGNQPAQPQL
AAQPAPVPAGGPNADPLNLFPQGLPSVGSNTAGANTLDFLRNSQQFQALRAMVQANPQIL
QPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGGEGNNVLGQLAAAMPQTISVTPEER
EAIERLEQMGFDHDLVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaaaactctcaaaggctctcactttgaaatcgaagtcaaacctgaa
gatacggttgccgatgtgaagaagaacatagaaacagttcagggttcagatgtttatcct
gctgcccagcagatgcttatccaccaggggaaggtacttaaagatgggacaacactcgaa
gaaaataaagttgctgaaagcaactttatagtaatcatgctaacaaagagtaagagctca
tctggaggaggttcaggaacgtcaactgcagcaacagctaagacaccacagtcaagtacg
gcagcacctagttcaactcctgcatctacagctgctcaagtcccagttgcatcgcctgca
gcagctccatccccagcgccagcctctgcccctgcccctgccccagccccagccccagcc
ccttctcctgctcctgctcctgcatcaactgttgtgccgggatctgatgtctatggccaa
gctgcttcaagcttggttgctggtaacaaccttgatggagcaattcagcagattcttgac
atgggtggtggaacgtgggatagggagacagttgttcgagccttacgggcagcttttaac
aatcctgagagggctgttgaatacttgtactctggtattcctgaggcggcagaggtccct
cctgttggcggaagtccacccagcgtgcaggcaggtaatcaaccggctcagcctcaactt
gcagcacaaccagcacctgttcctgcaggcggacccaatgcagatcccttgaatctcttt
cctcaggggcttcccagtgtgggatctaatactgctggtgcgaacaccttagactttcta
aggaacagtcagcagttccaagctttacgggcaatggttcaggccaatccacaaattttg
cagcccatgcttcaggagctaggcaagcagaatccccacctaatgaggcttatacaggag
caccaggctgattttcttcgccttatcaatgagcctgttgaaggaggagaaggcaacaac
gtattgggccagcttgcagcagcaatgccacagacgatatctgtaacacccgaagagcgt
gaagccatagaacgtctcgaacaaatgggctttgatcatgaccttgtactggaggttttc
tttgcctgcaacaaaaatgaggagctcgctgctaactacctcttagatcacatgcacgag
tttgaagagtga
DBGET
integrated database retrieval system
