Solanum stenotomum: 125852909
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Entry
125852909 CDS
T08385
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125852909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125852909
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
125852909
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
125852909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
125852909
NCBI-ProteinID:
XP_049388541
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MMLKGRESLIRLIGRRRRFLRRRSLITSSVPQIGCKEDKDEVNTESGNGNGNGDEESGNG
NGNGDEEWVDCPVCGTKVRGEEPVINSHLDKCLARGTKRKLSQCTLFQLKFCTRPKVTAS
SIDSDLTRTEFGSSANDGDIHALASEMRNSDVSKNNVQDESSSSSVSLTLTTSRSNIFTR
NSSICNRVDRAENLDGLPDFDNECKPLSGAKSMQIVGLEVFPQHQISDDRIDNFTGSPLS
LSENRTPTFVEPLEDDDNSKILLDTFIVGRKFADDTELIIGAMVMLSRDSENVKDPNAIK
VLTKDTGHSKELGFIPRELAQYVSPLIDNFQMRFEGHITSIPRHPHAVVPIQIYSSSIAS
FGEKDSSSLQEFNSFRRNALCAAEFSKTRPPIPAKYQHNLLLLLKEVLKINAHLFAEGEK
TLLKAFLSLSDDSQRLFARLYARKGPWFRTASISYAEICDYKEAVKGLSEAECVTLFESI
DKLQIGDLKEVLDVLNVGELRDLYSLNKSHKKIVRNSDHGIRKQDYVGRLLGAYESGLCP
NLQSMILGKTGSCIRISALAESVFWRAERLFFLNGEQDLSAFLLVDLGIVKYPAYNCIFT
DQIFPDRSDLLSYEEAIEVAQVMDESLDENNNELVSRCIEISASHVSSFVEEDRSSHFGS
MTAFLSCFSASWVYSKVILLGVSFLEHERRYKDAIDLLKLLLVKFKSDRRRGYWTLRLSI
DLEHVGCLDESLEVAEKGLLDSWVRAGCIVALQRRVLRLGKPPRRWKTPSFSNSINRKIV
EVQVQGRPVNCKTGVKNVFYGEDGERCGVEELALEYYAGEGGCWHGVHTESGIWLTIFGL
LMWDIVFADVPNVFRTKFQTAPLDLETDSFYEVRRGLIEGLLDKIEHGMAEELLIMSWES
HMGTVCRGVKWDKHSLSELRAAVTCIGGPCLASICRNLAQDYRSWSSGMPDLLLWRFHDN
YRGEAKLVEVKGPRDKLSEQQRAWLLFLMDCGFNVEVCKVSHSPI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaaagggcgagaaagtttgatcagattaataggtcggcgtcggcgatttctc
cgtcgccgttctcttatcacttcatctgttcctcagattggttgtaaagaagataaggat
gaggtaaacactgaaagtggaaatggaaatggaaatggtgatgaggaaagtggaaatgga
aatggaaatggtgatgaggaatgggttgattgtcctgtttgtgggacgaaggttcgaggt
gaagaacctgttattaactctcatttagataaatgccttgctagaggaactaaacgcaaa
ttgagccagtgcacccttttccagttgaaattttgcacacgacctaaagttacagcctca
tccattgattcagacttgacaaggacagagtttggttcaagtgcaaatgatggtgatatc
catgctctggcttctgaaatgagaaactcagatgtttcaaaaaataatgtccaagatgaa
tccagttcatcttcagtctcacttactctgacaaccagcagatcgaatattttcacgaga
aatagtagtatctgtaatagggttgatcgagcggaaaacttagatggtctccctgatttc
gataatgaatgcaaacctctgtctggtgcaaagtcgatgcaaattgtggggctagaggtt
tttcctcaacaccaaataagtgatgatagaattgacaacttcacaggctcgcctttgtca
ctttctgaaaacaggactcctacatttgtggaacctttggaagatgatgataactctaag
attttgcttgatactttcattgttggccgtaagtttgctgatgacacagagttaattatt
ggagcaatggtgatgctttcaagagattccgagaatgtcaaggatccaaacgcaatcaag
gttctaacaaaagataccggtcacagtaaagagctaggttttatccccagggaattggca
caatatgtatctccattgattgacaatttccagatgaggtttgagggccatataacttct
attccacggcatcctcatgcagttgtcccaattcagatatattcctctagcattgcttct
tttggtgaaaaggactcctctagtctccaagaatttaattcctttaggagaaatgctcta
tgtgctgctgaattctcgaagactcgtcctcctatccctgcaaaataccagcataacctt
ctattgttactaaaggaggttttgaagatcaacgcacatctttttgctgaaggcgagaag
accttattgaaagcttttttatcactctcagatgatagtcagaggctctttgctcggctt
tatgcacgtaaagggccatggtttcggacagctagcatatcatatgctgaaatatgtgat
tataaagaagctgtgaagggtctttctgaagcagaatgtgttactttattcgaatcaatt
gataaactacaaattggtgacttgaaggaggtattggatgtccttaatgttggtgaacta
cgggacctctacagtcttaacaagtcacataagaagattgtccggaactctgatcatggt
ataagaaagcaagattacgttggtcggcttcttggtgcatatgaaagtggtttatgcccc
aatcttcaaagtatgattctaggaaaaactggaagctgtatcaggatatctgcattggct
gaatctgtcttttggcgtgctgagaggctattttttctgaatggagagcaggacctgtca
gcattcttacttgttgacttgggcattgtaaaatatcctgcttataactgcatattcaca
gaccagatttttccagacagaagtgacctattgtcttatgaggaggccattgaggttgca
caagttatggatgagtctcttgacgagaacaacaatgagttggtatcaagatgcattgaa
atttctgcctctcacgtatctagctttgtggaggaagatagatcatcacattttgggtcg
atgactgcatttttatcttgcttttcagccagttgggtatattctaaggtgatcctgttg
ggtgtttctttcctggagcatgaacgtaggtataaagatgcaatcgatttgcttaagctg
ctgttagttaaatttaaatctgatcgaagaaggggatattggactctgaggctctcaatt
gatttggagcatgttgggtgccttgatgagagtcttgaagtagctgaaaaggggttgcta
gattcttgggttcgcgctggctgtatagtggctctacagaggcgggttctgcggttgggt
aagccccctagacgttggaaaactcccagtttttcgaattccatcaataggaagatagtt
gaggttcaggttcagggcagaccagtgaactgcaaaacaggggtgaagaatgtcttttat
ggtgaggatggagaacgttgtggagtagaagagcttgctcttgagtattatgctggagaa
ggaggatgctggcatggtgttcacactgagagtgggatttggttgactattttcgggctt
ctaatgtgggacattgtatttgctgacgtaccaaatgtattccgtaccaaatttcagact
gcacctttggatcttgaaaccgatagcttttatgaagtcagaaggggtcttatagaaggt
cttctagataaaattgagcatggcatggcggaagagttgcttatcatgtcatgggaatca
catatgggaacagtctgtaggggagttaagtgggacaagcattctctgtctgagctccga
gcagcagttacatgcatcggaggtccttgtcttgcatcaatctgtcggaatttggctcaa
gattacaggagctggtctagtggaatgcccgacttattgctgtggcgcttccatgataac
tacagaggtgaagcgaaactcgttgaagtgaaaggcccgagagacaaactttctgaacaa
caacgtgcatggttactctttttaatggactgtggcttcaatgttgaggtatgcaaagtg
agtcattccccaatatag
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integrated database retrieval system