Solanum stenotomum: 125853488
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Entry
125853488 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125853488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125853488
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125853488
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
HECT type E3
125853488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_EZ
Gasdermin
Motif
Other DBs
NCBI-GeneID:
125853488
NCBI-ProteinID:
XP_049389138
LinkDB
All DBs
Position
1:complement(928719..940529)
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AA seq
1894 aa
AA seq
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METRSRKRAEATSSAPSSSSSGPTTRAAKRARVTAVSTSTSTVNSTPVAPTASISTRSRI
TTRSQDSLASSTPMDSTNESSGSASRNRRGKNPSHGSDKDNLDKGKEKEHEVRVRDRERD
REAERILGLNIDSGGAGEDDDNDSEGGVGILHQNLNSASSALQGLLRKLGAGLDDLLPSS
GMGSASSSHQSGRLKKILAGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPV
LVGLLNHENNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQS
LQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDASDFVLE
AVPLLTNLLQYHDAKVLEHASICLTRIAEAFASYPEKLDELCNHGLVTQAASLISTSNSG
GGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSDLVATVSISPAL
SKPPEQIFEIVNLANELLPPLPQGTISLPAGTNLLIKGSAIKKSSASGSTKQEDMNPSSQ
EVSAREKLLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSAIGKLMYFSSANMIQ
SLNNVTNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFAKMFVREGVVHAVDALIL
SPSHGSSTSQPSSAEKDNDCIPGSSRSRRNRRRGSNVNADASSIEAPKSTVPGSGSPPNS
LEIPKTSSNLRIAVSAGAKSFKDKYFPSDSGATEVGVTDDLLRLKNLCMKLNAGVDEQIS
KPKGKSKASVPRLGDISASKEDTLAELVASMLGELSKGDGVSTFEFIGSGVVAALLNYFT
CGYFSKERISDTNLSRLRQQALRRYKSFIAVALPFSVGGNMVPMTVLVQKLQNALSSLER
FPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASLAA
IEDFLWPRVQRVESGQKALASVGNSESGTTAAGVGACPATSTPASGSRRTRSRSAVNIND
GAKKDPPQEKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKEAEVKSVNGESSS
EDDELDMSPVEIDDALVIEDEDISDDDEDDHDDVLGDDSLPVCMPDKVHDVKLGDSSEDS
PATQTPNDNQTNAAGGSSSRAASAQGSDSVEFRSGSSYGSRGAMSFAAAAMAGLASANGR
GLRGARDRHGRPLFSTSEPPRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERYGGTDF
LSSDGSRLWGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASASADPSLHRAS
LLDSILQGELPCDMEKSNSTYNILALLRVVEGLNQLAPRLRVQSVIDDFSEGKILSLDEL
NTTGVKSHSDEFVNSKLTPKLARQIQDALALCSGSLPSWCSQLTRSCPFLFPFETRRQYF
YSTAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYS
SQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQRVGLRMWRTSSSASVHSMEVGVDEKLS
GGDKELVQAPLGLFPRPWSSTVETADGNQFPKVIEYFRLLGRVMAKALQDGRLLDLPLST
AFYKLVLGQELDLYDILSFDAELGKTLQELQALVCRKQNLESIGGQGQENINYLHFRGIP
VEDLCLDFTLPGYPEYVLKAGNNNVDLCNLEEYVTLVVDATVRTGIGRQMEAFRSGFNQV
FEISALQIFSPTELDYLLCGRKELWKAETLVDHIKFDHGYTAKSPAIVYLLEIMGEFTPE
QQRAFCQFVTGAPQLPPGGLAVLNPKLTIVRKHSSSASNTAPNGNMPSESADDDLPSVMT
CANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagccggaagcgggcggaggccacctcatcagcgccttcttcttcttcc
tctgggccaaccacccgcgccgctaagagagcccgtgtcaccgccgtttctacttctact
tctaccgtcaattccactcccgttgccccaactgcatcgatctcaactcgttctcgcatc
acaactcgttctcaggactcactagcatcttctacacccatggactccaccaatgaatct
tctgggtcagctagccgaaaccgccgtggtaagaaccctagtcatggttccgataaggat
aatttggataaaggtaaggagaaagaacatgaggttagagtcagggatagagaaagggat
agggaagccgagcggattcttggattgaacatagattctggtggtgctggtgaggacgat
gataatgatagcgagggcggtgttgggattttgcaccaaaatttaaattcagcaagtagt
gcacttcagggactgcttaggaaattgggtgctggattggatgatttgctccctagctct
ggaatggggtcggcatcatcatcccaccaaagtggccggctcaagaagatattagctggt
ttaagggcggatggggaggaaggaaaacaggttgaagctttgactcagctgtgtgagatg
ctatccattggaacagaagactccctgtccacattttctgtggactcatttgtaccggta
cttgtaggactgctcaatcacgagaacaatcctgacattatgcttcttgcggcccgtgct
cttacccatttggttgacgttctaccttcttcctgtgctgctgttgtccattatggagct
gtttcatgctttgtagctcgtctgcttacaattgaatacatggacttggctgaacagtct
ttgcaagctctaaagaagatatctcaggaacacccaactgcttgtttgagggctggtgct
ctgatggctgtgctttcttatctcgatttcttttctactggtgttcagagagtagcattg
gcgactgctgctaatatgtgcaagaagcttccttcagatgcgtctgattttgtcctggaa
gctgttcctctcttaacgaatctcctccaatatcatgatgcaaaggtattagagcatgct
tctatctgcttgacccgtattgctgaagcatttgcgtcatacccagaaaagcttgatgaa
ctttgcaatcacggacttgttacccaagctgcatccctcatctcaaccagcaactctgga
ggtggacaggcttcactcagcacgtcaacctacacaggtttaatcaggctactttcgaca
tgtgctagtggctctccgcttggagctaaaaccttactgctgcttggaataagtggaata
ctcaaggatattctatcaggttccgatcttgtggccactgtgtctatttcacctgccttg
agcaaacctccggaacagatttttgagattgtgaacctggcaaatgagctccttcctccg
ctgcctcaaggaaccatctctcttccagccggcactaatctgctcattaaaggttctgct
ataaagaaatcatctgctagtggttctaccaaacaggaggatatgaatccatcttcccag
gaggtttcagctcgagaaaaattgttgaatgatcaacctgaacttctgcaacaatttgga
atggatcttcttcctgttctgatccaggtatacggatccagtgtgaatagtccagttcgc
cacaagtgcctctcagctattggaaaacttatgtatttcagcagtgcaaatatgattcaa
tctctaaataacgtcactaacatatcaagtttcttggctggagtattggcctggaaggat
cctcaagtgctggtgcctgctcttcaagtagcagaaattctaatggaaaagcttcctgga
atctttgccaagatgtttgtgcgagaaggtgttgttcatgccgtagatgctctgatattg
tctccctcccatggttcttctacttcccagccatcttctgctgagaaggacaatgattgt
atacccgggtcatctcgttctagacgtaaccgacgtcgtggcagtaatgtaaatgcagat
gcaagttccattgaggctcctaaaagtacagttccagggagtggatcaccaccaaattca
ctggaaataccaaagaccagttctaaccttcggattgcagtcagtgcaggtgccaaatct
ttcaaagataaatacttcccttcagattctggggctactgaggttggtgttacagatgat
cttttacgattgaagaatctctgtatgaaattgaacgctggtgttgatgaacaaatatct
aaacctaaaggaaaatcaaaagcttctgttcctcggcttggggatatttctgccagtaag
gaagacactttggccgaactggtagcttccatgctgggggagctcagcaaaggggatggt
gtatcaacttttgagttcattggaagtggagttgttgcagctttgctgaactattttaca
tgtggatatttttcgaaggaaagaatctcagatactaacttgtctaggcttcgacaacaa
gcactcagaagatacaagtcttttattgcagttgcccttccattcagtgtaggtgggaat
atggttcctatgactgttttggttcaaaaacttcaaaatgctttgtcttccttggagagg
ttccctgtcgtgttgagtcattcttcaagatcatctactggaaatgcacgactttcttca
ggtttaagtgctttatcacaaccattcaagctacgcctttgcagagctcaaggagacaag
acactccgtgactactcttcaaatgttgtgttgatcgatcctttagcaagtctagcggct
attgaagactttctgtggcctcgagttcagagagttgagtctggtcaaaaggccttggca
tcagtaggcaactctgagtctgggaccaccgctgcaggggttggtgcttgcccagcgacc
tctactccggcttctggatctcgtcgtacacgttctaggtcagcagttaatataaatgat
ggtgcaaagaaagacccaccacaggaaaaaaatggaagttcatccaagggcaaaggaaag
gctgttctgaagcctgctcaagaagatggcaggggaccccagacaagaaatgctgctcga
agacgagcagcattggataaagaagcagaagttaaatctgtgaatggggaatctagttct
gaggatgatgagttggatatgtcacctgttgaaattgatgacgctttggttattgaggat
gaagatatatctgatgatgatgaagatgaccatgatgatgtgttgggcgatgattctctt
cctgtttgcatgccggacaaagttcatgatgtcaaattgggcgattcttcggaagatagt
cctgccacacagacgccaaatgataaccagacaaatgctgctggtggttcaagcagcaga
gctgcttctgctcagggatctgattctgttgagttcaggagtgggagttcttatggttca
aggggtgcaatgtcatttgctgcagctgccatggctggacttgcatctgcgaacggtaga
ggtttgagaggagctagagatcgtcatggacgccctctatttagcactagcgaaccaccc
agacttgtattttctgcaggcggaaagcagcttaataggcacttgactatctaccaggcc
atccagcggcaacttgtcctcgacgaggatgacgaagagaggtatggtggcactgacttt
ctgtctagcgacggaagcagactttggggtgatatttacactatcacataccaaagagct
gacagccaagcagagaggtctacaaaaggggatgggagctcaacttccaccaagtctaat
aaagctagttcttcagcaagtgccagtgccagtgctgatccctcattgcatcgagcatca
ttgttagatagtatattacagggagaacttccttgtgatatggagaaaagcaattctact
tacaacattttggcccttttacgtgtagtagagggattaaaccagctggccccacgatta
cgtgtgcagtcagttattgatgatttttctgaaggcaaaatattgagtttagatgagctc
aatactactggtgtcaaaagtcactcggatgaatttgtaaacagcaagctcactccaaag
ttggcccgacagatacaggatgctctagccctttgtagtgggtctcttccatcatggtgt
tcccagttgacaaggtcctgtccgtttctttttccatttgagactcggcgccagtacttc
tattcaacggcctttggattatctagggctttatatcggcttcaacagcagcaaggtgca
gatggtaatggatccaccaatgagagagaggtcagggttgggagactacagcgccagaaa
gttcgtgtctctaggaatcgcattctggattctgctgcaaaagtaatggagatgtactct
agccaaaaagctgttctcgaggtcgaatattttggtgaagttggcactggtttgggccca
actctggaattctataccctgttaagtcgcgatctgcaaagagttggactgagaatgtgg
agaacaagttcctcagcaagtgtacattcaatggaagtgggtgtggatgaaaaattgagc
gggggtgataaagagcttgtccaagcacctcttggattattcccacgtccctggtcatca
actgttgaaactgcagatggcaaccaattcccgaaagtgattgaatatttcagattgcta
gggcgtgtgatggcgaaagcacttcaagatggacggcttttggatctccctctgtcaact
gcattttacaagcttgttcttggccaagagcttgatctgtatgatattctttcttttgat
gctgagttaggaaagactttgcaagagttgcaagctcttgtttgccgtaaacaaaatcta
gaatcaattggaggccagggacaagagaacattaattatttgcattttcgtgggatccca
gttgaggatctttgtttagacttcacgctcccaggctatcctgaatatgttctgaaagca
ggcaataataatgttgatctttgtaacttggaagaatatgttactttggtagttgatgcc
actgtgaggacgggaattgggcggcagatggaagcatttagatctggcttcaatcaggtt
tttgagatttcagctctgcaaatattctctcctactgagttggactacctgctttgtggt
cgtaaagagttatggaaggctgagacgcttgtagatcatatcaagtttgatcatggatat
acagccaagagtcccgccatcgtttatttattagagatcatgggagagttcactcctgag
cagcaacgagcattctgtcagttcgtgactggtgctccccagcttcctccaggtggtctg
gccgtgctcaatcctaagttgacaatagtgagaaagcattcatctagtgctagcaataca
gcaccaaatggtaatatgccatcagaatctgcagacgacgacttacctagtgtgatgaca
tgtgctaactacctgaaactgcctccctattctacaaaggaaataatgtacaaaaagttg
ctctatgctatcaatgaaggtcaaggatcatttgatttgtcgtaa
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