Solanum stenotomum: 125853515
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Entry
125853515 CDS
T08385
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125853515
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125853515
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125853515
NCBI-ProteinID:
XP_049389175
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Position
1:21835637..21839751
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AA seq
432 aa
AA seq
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MLFRILFIVLLATSLFSTSCNGKKKIGKPIKHGHNAPKNGHVKKRTQAIIDIQSFGAKGD
GLSDDTEAFIKAWKKTCKTKNGVLLIPRHKIYYIGPIKFHGPCKKGLRMMINGELRASKD
ISDYKEDKRHWLLFQNMENFIVEGVGSIDGNGQVWWKSSCKVDKTIPCNTQTLTVPTAMS
FYNCTNLKVRNLEFKNPQKMHLTITKSELVEVSRLKITAPSDSPNTDGIHVSGTKDIDIH
HSYIETGDDCISIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDVVSNIYVHDATLRGT
TNGLRIKSWQGGRGYAKDILFQNIQMVNVTNPIIIDQFYCDQDKPCKEQKEAVHVSNIMF
KNIKGTSSTQTAIKLKCSKTVPCKGIQMENVNIRHEGGLTVKALCTNVKYTTKGVLFPKC
PSEPHPLAFLWN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagaattctctttatagtattgttagccacttcattgttttcaacttcttgt
aatggaaaaaagaagattggaaaaccaataaaacatggtcataatgcaccaaaaaatggt
catgtgaaaaagaggacacaagcaattattgatatacaatcttttggagccaaaggtgat
ggactttcagatgatacagaggcatttataaaggcttggaagaagacatgcaaaacaaaa
aatggtgtgcttttgattccaagacacaaaatatattacattggaccaattaagtttcat
ggtccttgtaagaaaggacttagaatgatgataaatggagaactaagagcttcaaaagat
atatcagattataaggaagataaaagacattggcttttattccaaaatatggaaaatttt
atagttgaaggtgttggaagtattgatggcaatggacaagtatggtggaaaagctcttgt
aaagttgataaaactattccatgcaatacacaaacactaacagttccaactgctatgtcc
ttttataattgtacaaatttgaaagtgagaaatttagagtttaagaatccacaaaaaatg
cacttaacaattaccaaaagtgaacttgttgaagtttcaagattgaaaattacagctcct
tcggatagccccaacactgatggaattcatgtttctgggacaaaagatattgatattcac
cattcttatattgaaacaggtgatgattgtatctcaatagtaaatggttccactaatgtt
agagcaagatatatacattgtggacctggccatggaataagtattggaagcttgggtaaa
aataaagaggaagatgttgtttcaaatatttatgtacatgatgctaccttgaggggaaca
accaatggattaagaataaagtcttggcagggaggacgtggatatgcaaaagacattctt
tttcaaaacatacagatggtgaatgtgaccaatcccataatcattgatcaattttattgt
gaccaagataaaccatgcaaagagcagaaagaagcagtgcatgtgagtaatataatgttc
aaaaatataaagggaacgagttccacgcaaactgcaattaaattaaaatgcagcaaaact
gttccatgcaaagggatacaaatggaaaatgtgaatatacgtcacgaaggaggtttaact
gtcaaagctttatgtacaaacgttaaatacacaacaaagggggtgttattcccaaaatgc
ccttccgagccgcacccattggcatttttgtggaattaa
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