Solanum stenotomum: 125853547
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Entry
125853547 CDS
T08385
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125853547
03012 Translation factors [BR:
sstn03012
]
125853547
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125853547
mRNA cycle factors
Stress granule specific factors
125853547
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-4
125853547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Rep_fac_C
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
125853547
NCBI-ProteinID:
XP_049389218
LinkDB
All DBs
Position
1:19103647..19111595
Genome browser
AA seq
1808 aa
AA seq
DB search
MSHNQSRADTRESSQYKRTGRSGSFYQHRGGRGSGGGGGGAAPPPVSSTSNPSLTSNRSF
NKKYYNAQGGQPRVSGAGAGLDSHLNGAHQQQPSHGASDVSVAIAHAPLPSATVKPTDAS
TQKVTRAVPRAPTSNVVPPTSEPSAPVTPAKNPGDASKSFPLQFGSISPGVMNVLQIPAR
TSSAPPNLDEQKRAQARSDTSRAIPSLPNPSTSKQPMPRKDAGPLDQSNHSEAYGVASKP
KRDVQILAPPSVTQTQKPSTHPMPGMHMQIPFHQPPQVPVQFGGPGPQIPSHSMSATSLP
MPMHLPIVNPPMQQPMFVSSLQPHPMQSQGMMHQGQGMNFSSGIGPQLPQQLGNMGMNMP
SQFSPQQAGKFLGQRKSVKITHPDTHEELRLDGSRSHPNMPPQSQPIASFPPGHPNYYPN
SYNSNSVFFQAPSSLPLGNTQSSQPPRPFNQVTVKPAAGGTHSGKEQLPSVSSSFGKDPV
RLSKPHGGDSAHSQKDTNTSHQSSTTQSRTGDGSKSASRPVENIQSTKGDDSISGKSSAA
GILSLTSQAPIESSTSLIRDSSVDAASETLGGPDSTEDQQKKQVTRGQLTVQEKALGKST
SVSSQTPQYPLTRPVEVSTAASVSTAVNTMESLSLSESAELRSHITGNCGKEDLSEPLDS
RNQEAGKPVLKTGDRNEVALPEAGKQDENKSSKPPSESLPVESTEVSGLTEEGSPKRAAY
ANIENGRPEIGVEDMNESVACSTGVDNMVDESFTSSTSNQDSTNIEACTSAIGLSAQDDQ
ESDIADPEEAPVTKSVVASQEFASDLLKNSDEATSKSEDENTETSNTGLVSKLSSGVKEK
SLVDSNVPKVAMARGKKKKKDLYKKADAAGATSDLYMAYKGPEKKDELGQSIETIELTSR
DDSMPPSANVPQEDLRSTKKVGEVKAEPDDWEDAADVSTPKLEAAPEHRKEVDGEDGDGV
TTKKYSRDFLLKFAEQCIDIPEGFNVAPDIADILINFNASAMREPFPSPGRGTDRPSSGH
RERRGSGVGDGDKWNKTPGPPMPGRDFQPDIGFGGNGIGFRPVPGGNSGVLRHPRAAMPI
QYAMSQYAVGQYAMGQFATGGILSGPMQSMGPPQGGGLRNGVDADRWQRGTAFQKGLMPS
PHTPTQNMHKAEIKYEVGKVSDEEQAKQRQLKAILNKLTPQNFDKLFQQVKEVNIDNDVT
LNGVISQIFDKALMEPTFCEMYANFCQHLAAELPDLSVDSEKITFKRLLLNKCQEEFERG
EREELEANVTNEEGEVKLSAEEREEKRVKARRRMLGNIKLIGELYKKRMLTERIMHDCIK
KLLGDYQNPDEENVEALCKLMSTIGEMIDHAKAKEHMDAYFDRLEKLSNNMKLSSRVRFM
LKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERHAQATRLARTPSLGGSSRRGQPMDF
APRGGSMLSSPGSQMGGFRPMSPQVRGYGMQDVRADERHSFENRTLSLPLTQRPLGDDPI
TLGPQGGLAKGMSSRGQPAGPSIDNMSSFGDSRRMVHAQSGYGSLSERPHYGLREELAPK
YMPERLSSQHDQSSVPERSVTYGNKERGFDTSRPPSPLVRSGGPTSAQNVAPDRILPEER
LQEMSMAAIKEFYSAKDEKEVALCVKDLNSPSFYPSMISLWVTDSFERKDMERDLLAKLI
IGLTLSRDVAISQDQLIKGFENVLTSLEDAVNDAPRAAEFLGRIFGKVILENVIPFNEIG
SLIYKGGEEEGRLVEIGLAAEVLGSTLEMIKVEQGDSAVSEICRSSNMRLENFRPQGSKK
QWKLDKFI
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaatcaatcaagggctgacactcgcgagtcgtctcagtacaagagaaccggc
cgatccggtagcttttatcagcaccgcggcggtagaggaagtggtggcggtggcggaggc
gccgcccctcctcctgtttcttcaacctccaatccatctttgacttctaacagaagtttc
aacaagaagtattataatgctcaaggagggcaacctagggtaagtggcgcgggtgctggc
cttgattctcatctgaatggtgctcatcagcaacaaccatcgcatggagcatcagatgtt
tctgttgctattgcgcatgcacctcttcccagtgctactgttaagccaactgatgcttcg
actcaaaaggttactcgagcagtacctagagctccaacttctaatgtcgtccctccaacc
tctgagccgtctgcacctgtcactcctgcaaagaatccaggagatgcatctaagtcattt
ccacttcaatttggatccataagtcccggtgtcatgaatgttctgcagatacctgcgcga
acaagctcagctccaccaaatctggacgagcagaagagagcccaggctcgcagtgacact
tcaagagctattccttcattgccaaatccatccacttccaagcagcctatgccaagaaag
gatgcaggacccctcgaccaatctaatcatagtgaggcttatggggtggccagcaagccc
aaaagagatgtacaaattttagctccaccttctgttacccaaacacaaaagccttctaca
catcccatgcctggaatgcacatgcaaatcccattccaccagccaccacaagttcctgtt
caatttggtggtcctggaccacaaattccatctcattccatgtctgctacatcattacca
atgccgatgcatctgccgattgtcaatccgcctatgcagcagccaatgtttgtctcaagt
cttcaaccccacccaatgcagtctcaagggatgatgcatcaggggcagggcatgaatttt
tcatcaggaattgggcctcagctccctcagcaattgggaaacatgggaatgaatatgccg
tcacagttttctccgcagcaggctgggaagttcctaggtcaacgtaaaagtgtaaagata
actcacccggatactcatgaagaattgaggcttgatggttcgaggtcacaccctaatatg
ccacctcaatcacagcctattgcatcatttcctcccggtcatcctaactattatcctaac
tcttataattccaattctgttttctttcaagctccaagttctcttcctctcggtaacact
cagagttctcaaccaccaaggccatttaatcaggtgacagtgaaaccggctgctggcgga
acacactcaggaaaagagcagttaccatctgtcagttcttcttttggaaaagatccagtg
aggctctcaaagccacatggaggagattcagctcactctcagaaagacacaaacacttca
catcaaagctccaccactcagtcaaggactggtgatggctcaaaatctgcttcaaggcct
gtagaaaatatacaatctactaaaggggatgattctatctcagggaagagctcagcagct
ggcatattgtcattgacctctcaagctcccatcgagtcttcaacatctctaattagagat
agtagtgtagatgcagctagtgaaacacttggtggcccagactccactgaagatcaacag
aaaaaacaagtaactagaggacagttgactgttcaagaaaaggctcttgggaaatctacc
tcagtttcaagtcagactccccagtatccactaaccagacccgttgaggtcagtactgct
gcttcagtgagcactgctgtcaacactatggaaagtctatctctgtcagagtccgctgaa
ttgagaagtcatatcactggaaattgtgggaaggaagatttgtctgaacctttagattcc
agaaatcaggaagcgggcaaaccagtacttaaaactggggatagaaatgaagtagcattg
cctgaggctggcaagcaggacgagaataagagctcgaagccgccttcagaatctcttccg
gtagaatctactgaggtgtctggcctgacagaagaggggtctccaaagagagcagcatat
gccaacattgagaatggtcgaccagaaattggagtggaagacatgaatgaatctgtagct
tgttcaactggagttgataacatggttgatgaaagctttacatcatccacttctaaccaa
gattctactaatattgaggcttgcacatcagcaataggtctatcggctcaagatgatcag
gaatcagatattgctgaccccgaagaagctcctgttacaaaatcggttgttgcaagtcag
gagttcgcctctgatttgttgaagaattctgatgaggccacttcaaagagtgaagatgaa
aatactgaaactagtaacaccggtttagtttccaagttgtcatctggtgttaaggagaaa
tctttggtggattccaatgtgcctaaggtcgctatggctagaggaaaaaagaagaaaaaa
gatttatataagaaggcagatgctgctggtgcgacttctgatctttatatggcgtataaa
ggtccagagaaaaaggatgaacttggtcaatctattgaaaccattgaactcacttctaga
gatgactctatgcctccatctgccaatgtgcctcaggaagatcttagatcaactaagaag
gttggtgaggttaaagcggagccagatgattgggaggatgctgcagatgtatctactcct
aaactagaagctgctccagaacatagaaaggaagttgatggtgaagatggtgatggtgtg
actaccaaaaaatattcaagagatttcttacttaaatttgcagagcaatgcatagatatt
cctgagggttttaatgttgctcctgatattgctgatattctaataaacttcaatgccagt
gctatgcgtgagccattccctagtccaggaagaggtactgataggccgtctagtggacat
cgtgaacgtcgcggaagtggcgttggggatggagacaagtggaacaagacgcctgggcct
cctatgcctggtcgagattttcagccagacattggctttgggggaaatggtataggattc
cgacctgtcccaggaggcaattctggtgttctgcggcacccgcgagctgcaatgcccatt
caatatgccatgagtcagtatgctgtgggtcagtatgccatgggtcagtttgccactggg
ggtatactatctggaccaatgcaatccatgggtccacctcagggaggaggcctgagaaat
ggagttgatgctgacaggtggcagcgtggaactgctttccaaaagggtttaatgccgtct
cctcatacacctacacagaatatgcacaaagctgaaataaagtatgaagtaggtaaagta
tcagacgaggaacaagccaagcagagacagctgaaagctattttaaataagctgactccc
cagaactttgacaaattattccagcaagtgaaagaagttaatattgacaatgatgtcaca
ctcaatggtgtaatttctcagatatttgacaaagctttgatggagccaactttttgtgag
atgtatgccaacttttgtcaacacctagcagctgagttgcctgatctgagtgtagacagt
gaaaaaatcacttttaagaggttacttctaaacaaatgtcaggaagagtttgagagaggg
gaaagagaagaactagaagccaatgtgactaacgaggaaggcgaggtaaaactgtcagca
gaggagagggaggagaaaagagtcaaagcccggagacgaatgttgggcaatataaaactg
attggtgaactttataagaagagaatgttgacagagagaattatgcatgattgcatcaag
aagttgttaggtgactatcaaaatcctgacgaggagaatgttgaagctttgtgtaagttg
atgagtacaattggggaaatgatagatcatgccaaagcaaaggaacatatggatgcatac
tttgataggttggagaagttgtcaaataacatgaaactttcttctagggtgaggttcatg
ttgaaggattcaattgatctaagaaagaacaaatggcagcaaaggagaaaagttgaaggg
cctaagaagattgaggaagtgcatagggatgctgcccaagaacgacatgcacaagctact
aggcttgctcgtactcctagtctgggaggttctagtagaaggggtcaacctatggatttt
gctcccagaggagggagtatgttgtcttctccgggctcccagatggggggtttccgtcct
atgtctccacaggtccgtggctatggcatgcaggacgtacgggcggatgagaggcattct
ttcgagaataggacattatcacttcccctgacccagaggcctcttggtgatgatccgatc
acacttggaccccaaggtggtcttgcaaagggaatgtcttccaggggccaacctgcagga
ccaagtattgataatatgtcaagttttggagactctcgaaggatggtacatgcccaaagc
ggctatggttctttgtcagagcgcccccattatggtttaagagaggagcttgcacccaaa
tacatgcctgagcgattatccagtcaacatgatcaatcaagtgtaccagaaaggagcgtg
acttatgggaacaaggagcgtggatttgacacatctcgtcctccttcaccacttgtaaga
agcggagggccaacttccgcacaaaatgtggctcctgacaggattttgccagaagaacgt
ctgcaggaaatgtctatggctgctatcaaggaattctacagtgcgaaagatgagaaagag
gttgctttgtgtgtgaaagacctgaattcacccagcttctatccatcaatgatctcactt
tgggttactgactcctttgagaggaaggatatggaaagggatcttttggcaaagcttata
attggtctaactctttctcgagatgtggcgataagtcaagatcagttaattaaagggttt
gaaaatgttctaactagcttggaggatgcagtaaatgatgcccctagagcagccgaattt
cttggtcgcatctttgggaaggtaatattggaaaatgtgataccgtttaatgaaataggg
agtttgatatacaaaggcggggaagaggaaggacgccttgtggaaataggtcttgctgct
gaagttcttgggagcacattggagatgataaaggtcgagcaaggtgattctgcagtttcg
gagatttgcagaagctctaatatgcggcttgaaaacttccggcctcaaggttcaaagaag
caatggaagctagacaaatttatttag
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integrated database retrieval system
