Solanum stenotomum: 125853581
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Entry
125853581 CDS
T08385
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
sstn
Solanum stenotomum
Pathway
sstn03440
Homologous recombination
sstn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125853581
03460 Fanconi anemia pathway
125853581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125853581
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125853581
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
UBA
HHH_8
UBA_3
Motif
Other DBs
NCBI-GeneID:
125853581
NCBI-ProteinID:
XP_049389253
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All DBs
Position
1:23592035..23608139
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AA seq
671 aa
AA seq
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MENKKVVVCPENEELAAYMWNKKQEMAQSPDGISENISMTLQKAYTNLCKSKTPIKTLKE
FSNIKGVGKWLLRLMKGYFEADDRDASSSEESDDSTEKGKKNKGTKRYMPQKNSVAYALL
ITLYRSTTNGEKYMHKQELIDATEASGLSRAPVGPEKGKGKPGQFSSPRDWYSGWSCMAK
LVSKALVAKSSCPAKYMLTEEGKEIAQECLLRSGIADSKEISASLTGFSNLNKRDKPDKA
TSSKSSNMEVRHTTSVIERGVPLSQSSDNVRERAVPLSQSTGKKKMNVIPSESLDRFIQM
GFSKEQVIQAYSEVLETSQNKDVLLLWPSVLCRLREDQVYGQVGSTRVEDRLFESTCNGT
VNSANPSCRADFAHCSNALRGCSSTVVDEQIPCLEIRSNPLAAPPLANGEKFKDVYEVVL
ILDDREQFTSRGSRSRKIVDNISTQFKIKIDVRRLPVGDAIWIARNKVIGTEYVLDFIVE
RKNVEDLQSSIRDNRYRDQKLRLLRCGLKKLIYVIEGDPNTCAAAESIKTACFTTEILEG
FDVLRTSGLGETLRKYGYLTQGINQYYRCMDNERSNSRLCPKFKEFIRKCEDLDKMTVSD
VFAIQLMQVPQVTEEAAIAVLDVYPTLSSLARAYSLLDGDVRAQEEMLKEQSNNLVSSAA
SKNIFQLVWSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagaataagaaagtggtggtatgtccggagaacgaagagttagcagcgtacatgtgg
aacaaaaaacaagaaatggctcaaagccctgatgggatttcggagaatatctcgatgact
ctccaaaaagcatataccaatctctgcaagtccaagaccccgattaagactctaaaagag
ttttctaatatcaagggtgttggaaaatggttgttgaggctaatgaaagggtattttgaa
gctgatgatcgtgatgcttcgtcgtctgaggagagtgatgactccactgagaaagggaag
aaaaataagggaacaaagcgttacatgcctcagaagaattccgtggcatatgccttactg
atcacgctgtacaggagtacaacaaacggtgaaaaatatatgcataagcaggagcttatt
gatgctactgaagctagtggcctttctcgtgcacctgttggacccgagaaagggaaagga
aaacccggacaatttagctcaccaagggactggtacagtggatggagctgcatggcgaaa
ttagtaagcaaagcccttgttgctaagtcaagctgccctgcaaaatatatgctgacagaa
gaaggcaaagagattgcacaggagtgtcttttgaggtcaggaattgctgattccaaagaa
atatcggcatctttaactggattttcaaatttgaataaaagggacaagccagataaggcg
acatctagcaaatcatcaaatatggaagttcgacatactacttcagtgatagaaagggga
gtgccattatctcaatcatctgacaatgtgagagaaagggcagtgccattatctcaatcg
actggcaaaaagaaaatgaatgtcattccatctgaatctcttgacaggtttattcaaatg
ggattttccaaggaacaagtaattcaggcttactctgaagtgttagaaacatcacagaac
aaagatgtattgttactctggccatctgttctgtgtcgtcttcgagaagatcaagtttat
ggtcaagttggcagtactagagttgaagatagactatttgagtctacttgcaatggaaca
gtaaatagtgcaaatccttcttgtcgtgctgattttgcacattgttcgaatgctttgaga
ggttgttcatccactgttgttgatgagcaaataccatgtctggaaattagatccaatccc
ttggcagcgccgccattggccaatggagagaaatttaaagatgtttatgaagtagttttg
atattagatgatcgggagcagtttacttctcgagggtcacgatccaggaagatagttgac
aacatcagcacacagtttaaaattaaaatagatgttaggcgcttgcctgttggtgatgca
atctggatagctcgtaacaaagttattggcactgaatacgttcttgactttattgtggag
aggaagaacgttgaagatttgcaaagttcaatcagggataaccgatatagagatcagaag
ctgcgtcttttgaggtgtggactcaagaagctgatatatgtcattgaaggagatcctaat
acttgtgctgctgccgaaagcatcaaaacagcttgtttcacaaccgagatcttggagggc
tttgatgtgctaagaacaagtggtttgggagagactctgagaaagtatggatatcttact
caaggaatcaatcagtactacagatgcatggataatgagcggtctaattccaggctttgc
cccaagtttaaagaatttattaggaagtgtgaagatcttgataaaatgacagttagcgat
gtgtttgccatccaactaatgcaggtcccacaggtgacagaggaagctgctattgctgtt
cttgacgtgtatccaacactttcatctcttgctcgtgcttactctctgcttgacggtgat
gttcgtgcacaagaggaaatgctcaaggagcagagcaacaacttagtgagttcagctgct
agtaaaaacatttttcaactggtttggagcagctga
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