Solanum stenotomum: 125853673
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Entry
125853673 CDS
T08385
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125853673
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125853673
Protein recycling
Other Rab GTPase associated proteins
125853673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Cir_Bir_Yir
Motif
Other DBs
NCBI-GeneID:
125853673
NCBI-ProteinID:
XP_049389353
LinkDB
All DBs
Position
1:complement(13163522..13177081)
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AA seq
503 aa
AA seq
DB search
MENSDVLGPSTAPLTWHDFLQRMRDPTAADFVKSIKSFIVSFLNNAPDAERDSAAVQEFL
GNMETAFRAHSLWAGCSEEELESAGEGLEKYVMTKLFTRTFASLPEDVKVDEQLHEKIAL
IQQFVRPENLDIKPTFQNESSWLLAQKELQKINMYRAPRDKLVCILNCCKVINNLLTSVS
AKDNPPGADDFLPVLIYVTIKANPPQLHSNLLYIQRFRRQTRLVSEAAYFFTNILSAESF
ISNIDAQALSMDETEFETNMESARALLSGLSADNNVLDQSDQNAGPVPGADTSDAKQSFR
SNRPPHPATQPNFSVASTETNIKNEDQYAKSQSSMEKIPSLSDLENRGASMLIKEDSISQ
VFQSFPYLYSQAGDLTVGDIEELLTNYKRLVIKYVCLAKGSGIDNPSPPLPNNEGQTQHP
EFEFNTESEAASAGEPIDETQKDKPIDETQKDEPIDETQKDEPIDDMQKDRPVDSSLLSK
SLESDESKLKENEELSSKGEEGS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcgacgtgttaggaccgtctactgcaccattgacgtggcatgatttcctt
caacgaatgcgtgatccaaccgctgccgatttcgtcaaatccatcaaaagttttattgta
tcatttttgaacaatgctccagacgcagagagggatagtgcagccgtgcaggagttcctt
ggaaatatggaaacagcattcagagctcattcactttgggctggatgttctgaggaggag
ttggagagtgctggtgaaggacttgagaagtatgtcatgacgaagctatttactcgtaca
tttgcttcacttcctgaagatgtgaaagttgatgaacagcttcatgagaaaattgctttg
attcaacaatttgttaggcctgagaatttggatatcaagccaacatttcaaaatgaatca
tcatggttgcttgcgcagaaggagctacaaaagataaatatgtacagggcaccaagagac
aaacttgtgtgtattcttaattgttgcaaggttatcaataatctcctgacttctgtttca
gcaaaggataaccctccaggagcagatgattttcttcccgttctcatatatgtcaccata
aaggctaacccccctcagctgcactcaaatctactgtatatacaaaggtttaggcggcaa
acccgcttggtttctgaagcggcatacttcttcacaaacattctttctgcagaatctttc
atttcgaatattgatgcacaagctctttctatggatgagaccgagtttgaaacaaatatg
gagtctgctcgagcacttctttctggtctttcagccgacaacaatgtactggaccagagt
gatcagaacgctggacctgttcctggtgcagacacttctgacgccaaacaaagttttagg
tcaaataggcctccacaccctgctacacagccaaatttctcggttgcatcaacagaaaca
aacatcaagaacgaggatcagtatgctaaaagtcagtcatcaatggaaaagatcccgtca
ctgtcggatctagaaaacagaggggctagtatgctgatcaaggaggatagcatcagccaa
gtgttccaaagtttcccctacctatattcccaggctggtgacctaacagtgggtgatatc
gaagaactactaaccaattacaagcgcctagttatcaagtatgtttgccttgctaaagga
tcaggcattgacaatccatctccaccattgcccaataatgaaggacaaactcagcaccct
gaatttgaattcaacaccgaatctgaagctgcctcagcaggagagccaattgatgagaca
cagaaagacaagccaatcgatgagacacagaaagatgagccaattgatgaaacacagaaa
gacgagccaattgatgatatgcagaaagacaggcccgtggattcttcactactttcaaag
tctctcgagtcagatgaatcaaagttaaaggaaaatgaagaactttcaagtaagggtgaa
gaagggagttag
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