Solanum stenotomum: 125853718
Help
Entry
125853718 CDS
T08385
Name
(RefSeq) cellulose synthase-like protein D4 isoform X1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sstn01003
]
125853718
Glycosyltransferases [BR:
sstn01003
]
Polysaccharide
Structural polysaccharide
125853718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
125853718
NCBI-ProteinID:
XP_049389406
LinkDB
All DBs
Position
1:complement(53835634..53839470)
Genome browser
AA seq
1108 aa
AA seq
DB search
MASLTAAPSKKTSKGSSSAQSVKFARRTSSGRYVSMSREDIDLSGELSRDYMNYTVQIPP
TPDNQPMDMSIAAKAEEQYVSNSLFTGGFNSVTRAHLMDKIIESEVYHPQMAGSKGSSCS
MPACDGKIMKDERGNDVIPCECRFKICRDCYMDAQKDVGLCPGCKEAYKVGDLDDEIPNF
SNGALSLPAPDGSKGMIRRNQNGEFDHNKWLFETQGTYGYGNAYWPDDRDGDDGDRSMPK
NMLDTSADIPWKPLSRVLPMSHSIISPYRLLIFIRLVLLGFFLAWRIQHPNPEAMWLYVM
SIICEIWFAFSWLLDQMPRISPVNRSTDLVVLREKFEMPSPSNPLGRSDLPGVDIFVSTA
DPEKEPPLVTANTVLSILAADYPVEKLACYVSDDGGTLLTFEAMAEATSFADLWVPFCRK
HAIEPRNPEAYFLLKGDPTKNKKRGDFVKDRRRVKREYDEFKVRINSLQDSIRRRSDAFN
AREEMKMLKQMKENETDLAEAIKVQKAIWMADGTHWPGSWSIPSRDHRNGDHPGILQVML
KPPSSDPLMGGGDQDKLLDFSDVDIRLPMFVYVSREKRREYDHNKKAGAMNALVRASAIL
SNGAFILNLNYDHYIYNCLAIREGMCFMMDRGGEDICFIQFPQRFEGIDPSDRYANHNTV
FFDGNMRALDGLQGPMYVGTGCMFRRFALYGFEPTKPDKTPQKDAEAEALKATEVDYDFD
VNILTKKFGNSTMLAESIPIAEFQGRPIADHPAVKFGRPPGALRTPKEPLDATNVAEAVS
VVSCWYEENTEWGTRMGWIYGSVMEDVVTGYRMHNLGWRSIYCITKRDAFRGSAPINLTD
RLHQVLRWAIGSVEIFYSRNNAILASRKLKFLQRLAYLNVSIYPFTSFFLVVFCFLPALC
LISGQFIVQNFNVTFLVYLLTIFICIIGSAMLEVKWSGVALEDWWRNEQFWVISGTSSHL
AAVVLGLLKVFMGCETSFTPTSKSVREDVDEAYAELYMVKWTPLMIPPIVIGMVNIIAIV
VAFSRAIFAIVPQWGKFIGGAFFAFWVLAHLYPFAKGLMGKRRKTPTIVFVWSGLIAITI
SLLWIAFGNPQAGPGAVQGVAGGGFQFP
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcttgacggctgcaccatcgaagaagacaagtaaaggaagttcaagtgcacaa
tcagtaaaatttgcacgtagaacgtctagtggacgatatgttagcatgtctagagaagac
attgatttgtcgggtgaattgtcaagagattacatgaattatactgtacaaatcccgcct
acgcctgataatcagccaatggatatgtctattgctgctaaagcagaagagcaatatgtt
tctaattcattatttacaggaggattcaacagtgtcactcgcgcacatcttatggataag
atcattgaatctgaagtttatcatcctcaaatggctggatccaaaggatcatcatgttcc
atgcctgcttgtgatggaaagatcatgaaagatgaaaggggtaatgatgtcatcccatgt
gaatgcaggttcaaaatatgtagagattgttacatggatgcacaaaaagacgttggtcta
tgccccggttgcaaagaagcttacaaggtaggggatcttgatgacgagatcccaaatttt
tctaatggagcattgtcattaccggcaccagatggttcgaaaggtatgattaggagaaat
caaaatggagagtttgatcacaacaaatggttgttcgagacacaaggcacttacgggtat
ggaaatgcttattggcctgatgatagggatggagatgatggtgatagaagtatgcctaag
aacatgttggatacatctgctgatataccttggaaacccctcagtagggtgttgccaatg
tcacatagcatcattagcccttataggttgctaatttttattcgactagtactactagga
ttcttcttggcatggagaatacaacatccaaacccggaggcaatgtggttatacgtgatg
tcaattatatgtgaaatatggtttgcattttcatggcttctggatcagatgcccaggata
tcgccagttaatcggtctactgacctagtggtactacgcgagaaatttgaaatgccatca
ccatccaatcctttaggtaggtcagatctaccaggagttgatatatttgtatcaacggct
gatccagagaaagagccgccccttgtcacagccaacactgtcctatccatcttagcagct
gactatcccgtggagaagttagcttgctatgtctcagacgatggcggtacccttctaaca
tttgaggcaatggcagaagctactagctttgctgatttgtgggtaccattctgcaggaaa
catgctattgagcctaggaatcctgaagcctattttctcctcaagggagaccctacaaag
aacaagaagagaggtgatttcgtcaaagatagacgaagggtaaaaagagaatatgatgaa
tttaaggtaagaataaacagtctgcaagattcaataagaaggagatcagacgcgtttaat
gctcgagaagaaatgaagatgttaaagcagatgaaagagaatgagactgatcttgcagag
gcaatcaaagtgcaaaaggctatttggatggctgatggaactcactggcctggctcatgg
tctatccccagcagggatcatcgcaatggtgatcatcccgggatccttcaggtaatgttg
aaacccccaagtagtgatcccctaatgggagggggtgatcaagataagctattagatttt
tcggatgtggacataaggcttccaatgtttgtgtatgtgtcgcgtgagaagagacgtgag
tatgatcacaataaaaaagcaggtgccatgaatgccctagtaagagcttctgccatttta
tctaatggtgcattcatactcaaccttaattatgatcactatatatacaactgcttagct
attcgtgaaggcatgtgtttcatgatggacagaggtggagaagacatatgttttattcaa
ttccctcaacgatttgaaggaatcgatccctctgatcgttatgccaatcacaacacagtg
ttttttgatggaaatatgcgcgcccttgatggtctacagggtcctatgtacgttgggacg
ggctgcatgtttaggcgatttgcactttatggattcgaaccaacaaaaccagataagaca
ccacaaaaagatgcagaggctgaagcattaaaagccacagaagttgattatgacttcgat
gtgaatatactaactaagaaatttggtaactccacaatgttagctgaatctattccaatt
gctgagttccaaggtcgtcctatcgctgatcaccctgctgtcaagtttggacgacctcct
ggtgctcttagaaccccaaaggaaccacttgatgccactaacgtagccgaagcagtctct
gttgtatcttgttggtatgaagaaaatacagagtggggtactcgaatgggatggatttat
ggttcagtgatggaagatgtggttactggataccggatgcacaatcttggatggcgttct
atatattgcatcaccaaacgcgatgcattccgtggatcagctcctataaatctaacagat
agactacatcaagtactacgttgggctataggttcagttgaaatcttttactcaagaaac
aatgcaattcttgcatcgcgaaaactcaaattcctccaacgtcttgcttaccttaacgtt
agcatttatcctttcacttcatttttcctcgtcgtcttctgttttctccctgcactctgc
ctcatatccggtcaattcattgtccaaaatttcaacgtcacgttcctagtatatctatta
accatatttatctgtatcattggttcagctatgttagaggtaaaatggtcaggggttgct
ttagaggattggtggagaaatgaacaattttgggttatttcaggtactagttctcatctt
gcagctgttgtgctaggtctacttaaagtattcatgggatgtgaaacatcatttactcct
acatctaaatccgtaagagaagacgttgatgaagcgtatgctgaattgtacatggtgaaa
tggacaccattgatgataccgcctatagtcattggtatggttaacataattgcaattgtt
gttgcattttctagagcgatattcgccattgtacctcaatggggaaaattcattggtggt
gcatttttcgcgttttgggtgttggctcacttgtatccttttgctaaaggactgatgggt
aaaagaagaaaaacacccacaattgtgtttgtttggtcaggtctcattgcaataacaatc
tcattgctatggatagcttttggtaacccacaagctggtcctggtgctgtacaaggggtt
gctggtggtggctttcaatttccttaa
DBGET
integrated database retrieval system
