Solanum stenotomum: 125853721
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Entry
125853721 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125853721 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125853721
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125853721
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125853721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125853721
NCBI-ProteinID:
XP_049389412
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Position
1:complement(7734021..7737658)
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AA seq
314 aa
AA seq
DB search
MKFFLNSIPLRNRRQNPNPIPPSPAMPSDLASDSGDGRQEEAASSSSAAVMNSDEEDVGY
KSPEEEVSTTSFSGTEIEDEQEGNREPTAEDEDRRELDGASSKSLVVVEAENAFLRTEKP
PTDDCCPICFGNFVVPCRGPCGHWYCGGCILQYWNYGAALQPCNCPMCSRKLTDLTPEAS
LYSQQDAEVIEVLKKVRKYNRLFIGGTYGLMLKVLGLPFYVKRVFNEMMNPDRPGAHLNK
LRIFAAVKMSLMCLIILPLHYPQCYIWLGCIFDEGVSTMLGKWLRLILLVIDSCRLVKQI
FVVNSLWSLKILDL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcctcaatagtattcctttacgaaatcgtcgtcaaaaccctaacccaatc
ccaccttctccagctatgccttctgacttagcttccgattccggtgatggacgacaggag
gaagccgcctcttcctcctccgccgccgtgatgaattcggacgaggaagatgtgggatat
aagtcgcctgaggaggaggtgagtacgacgtcgttttcaggaacggagatagaggatgag
caggaaggtaatcgtgaaccgacagcagaggatgaggaccgtcgggagttggatggtgca
tcttcgaagagccttgtggttgttgaggcagagaatgcgtttttgaggacggagaagcct
cctactgatgattgttgtccaatttgctttggaaattttgtcgttccttgccgaggtccc
tgtggccactggtactgcggaggttgcattttgcagtattggaactacggtgctgcactt
cagccttgtaactgccccatgtgttcgaggaagcttactgatttgacacctgaggcatca
ttgtatagtcagcaggatgcagaagtaattgaggttttgaaaaaagttcgaaagtataat
cgcctttttataggtggcacttatggcctcatgctgaaggtgcttggactgcccttttac
gtgaagagagtgtttaatgaaatgatgaatcctgacaggcctggtgctcatttgaacaaa
ttgcgtatttttgctgccgtcaaaatgtcattgatgtgtttgattattctgccattgcac
tatcctcagtgttatatttggttgggctgtatcttcgacgaaggcgtttccaccatgtta
gggaaatggctgaggctgattttgctggtcattgacagctgccggctggtgaagcagata
tttgtcgtcaactcactgtggagcttgaagattttggatttataa
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