Solanum stenotomum: 125853772
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Entry
125853772 CDS
T08385
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125853772
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125853772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Rad50_zn_hook
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
125853772
NCBI-ProteinID:
XP_049389473
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All DBs
Position
1:complement(97284929..97300280)
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AA seq
622 aa
AA seq
DB search
MVYCGYCAKNISQPDYADGKICCPLCGRVLDEDNILSDPTFVKDAAGQSQLAGKIVGSVQ
SVYSTSRERTLREAKKGIESVMSALGIDGGDSIAHPALAFYRIAVERNFTRGRRKEQVEA
ACVYIVCRESKKPFLLIDFSEYLRINVYILGAVFLQLCKLLSIVDHQFIQKPVDPSLFIH
RFTDRLFGGREPNVSRTALLIVASMKRDWMQTGRKPSGVCGAALYIAALSHGLNRSKSEI
IKVVHICEATLTKRLIEFENTESGSLTIEEFNTRAQELEKEERLAQQFCSGSKGSGITEV
LCEHKESVELPFAHGLCESCYSDFVTLSGGLDGGSEPPAFQDAERGRLVAKKAAEDPKFS
MSNQVENNVTEHEQEGNTQSVTGSKNVQISGSEQIDAGEFSVAKAEHNMTHDTVHDMDCM
GPDDHDESGNFPDIDDVEIDIYLLDEEAKRCKKIIWEKMNPEYEEKAANEAAALAAKKAD
EFILANCSEDVQNARRLAAAAANNVAESRKEKRQKRAAELKNSGPAKTPFEATKQMLTRK
RLCTKINYDLLEKLFDDSEILQNPKKSRNVDDSTNHNESSKNFLEEDEIYEEPFVQYDED
MRYDEDVGGYDYDQHYGYDDEY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggtatattgcggttattgtgcaaaaaacatcagtcaacccgattatgcggatggcaaa
atatgttgtcccttatgtggaagagttcttgatgaagacaatattttaagcgaccctact
tttgtcaaggatgctgccggacagagccaattggcaggaaagattgtgggttctgtccaa
agtgtctattcaacttcacgagaaagaacactacgtgaagcaaaaaagggtatagagagt
gtgatgagtgcattaggaattgatggtggtgattcaatagctcatccagctttggccttc
tataggatagcagttgagaggaatttcacaaggggacgtaggaaagagcaagttgaggct
gcttgtgtttacattgtttgtagggaaagcaaaaagccattcctactcattgacttttcc
gagtacttgaggataaatgtgtatattttaggtgctgtgttcttgcagctttgcaaactt
ctaagcattgtagatcaccaatttattcaaaaacctgtggatcctagccttttcattcat
cgattcactgatcgtttatttgggggaagggagccaaatgtttctagaactgcacttctc
attgtggccagcatgaagcgtgattggatgcagacagggagaaagccaagtggggtatgt
ggagctgcactatacattgctgctctttcgcatggactgaatcgttctaaatcagaaatt
attaaagttgtacatatttgtgaagcaacattgaccaagcgtttgattgaatttgaaaac
acagaatctgggagcttaacgattgaggagttcaatacaagagcccaggagcttgagaaa
gaagagaggctggcccaacaattttgttcgggatcaaaaggatctgggatcacagaagtg
ctatgtgaacacaaagaaagtgtggagctgccctttgctcatggtctttgtgaaagttgt
tacagtgattttgtaacactttcgggtgggcttgatggaggatctgaacctcctgccttc
caagatgctgagaggggaagattagtggcaaaaaaagctgctgaggatccaaaattttcc
atgtccaatcaggtggagaacaatgtcactgagcatgaacaggaagggaacacccagagt
gtgaccgggagtaaaaatgtgcagatatcagggtctgagcaaatagatgcaggggaattc
tcagtggctaaagctgagcataacatgactcatgatacagtacatgacatggattgtatg
ggtcctgatgatcatgatgaatcagggaacttccctgatattgatgacgtagagattgac
atttatcttctcgatgaggaggcgaagcgctgtaagaagatcatttgggaaaaaatgaac
ccggaatatgaggaaaaagcagctaatgaagcagctgcattagctgcaaagaaggctgac
gagttcattttagctaactgttcagaggatgtgcaaaatgcacgaaggcttgctgctgct
gctgctaataatgttgcagaatcaagaaaggaaaaacgacagaaaagggctgcagaactg
aaaaattctggtcctgctaaaaccccttttgaagcaacaaagcaaatgttaactagaaag
aggctatgcactaagatcaactatgatctgctcgaaaagctttttgatgattctgaaatt
ctacagaacccaaagaagagtcgaaatgtggatgattcaacaaatcataacgagagcagc
aaaaattttctggaagaagacgagatttatgaagaaccatttgtgcagtatgatgaggat
atgcgttacgatgaggatgttggaggatatgactatgatcaacactatggttatgatgat
gaatattga
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