Solanum stenotomum: 125853891
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Entry
125853891 CDS
T08385
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125853891
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125853891
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
125853891
NCBI-ProteinID:
XP_049389594
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Position
1:complement(8102027..8109191)
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AA seq
570 aa
AA seq
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MAGEKIIEKPEAVAPGLKSDPSIKLIEKDLVSKKDGKASDSVSSLGAVTGIKGGIDQPPA
AEQGAYYPPTSYCDYYYPGYNGTYNQLDEQAYFNAGVQSDNGSLLYYMPGYNPYSAGFVG
GDGKQPYPSSGYLQQPVSYGSDSMPCYTWGSPYCADITNSAAPKPGNVKSTFGRNGSVKS
NGFNSTKTNSSFSSKNSTVLFNPKSRPSTAMSNPTKSVHQAQPFNPVNKFQSDVQSGGLM
KGFHLVGDYPSYTSQNQGFFMPYDPINCQTNSRMWNGNYRVKPRGNFTRNGVFEATNELP
RGPRANGRSVPSKPSAEEDQLVPTVQREKYNKEDFKTQYDNAKFYIIKSYSEDDIHKCVK
YDVWSSTPNGNKKLDTAFVEAEAKSSGTGSSCPVFLFFSVNGSGQFLGVAEMVGQVDFNR
NMDFWQLDKWSGFFPLKWHIVKDVPNTQFRHIILENNDNRPVTYSRDTQEIGLKEGLEML
NILKNYSEKTSILDDFNFYEKREKVLKAKRSSKPAIQADVYEKADSLKQFKGGDNILEEE
LKTNSADPTAPLVSLTKNLSINSRPFKSSV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgagaagattatagaaaaacctgaagctgttgctcctggactgaaatctgat
ccctctatcaaactgattgagaaggatttggtttcaaaaaaagatggaaaagcttctgac
tcagtgtcttccttgggagctgtgactggcatcaagggtggaattgatcaaccacctgct
gcagagcaaggtgcttattatccacctactagctattgcgattactactacccaggatat
aatgggacttataatcagttagatgagcaagcttactttaatgcgggtgttcagtcagat
aatggttcccttctctactatatgcctggctataatccttacagtgctggatttgtggga
ggcgacgggaagcagccctatccttcctctggatatcttcagcaacctgtctcatatggt
tcagattccatgccatgttatacatggggctcgccatactgtgctgatatcaccaatagt
gctgctcccaaacccgggaacgttaaatcaacttttggacgaaatggttcagtcaagtcg
aatggttttaattccacaaaaacaaatagttctttctcaagcaaaaactcgactgtactt
tttaacccaaagagtcgaccatctactgccatgtcaaatccgacaaagtctgtccatcaa
gctcagcctttcaatccagtgaataagtttcagtccgatgtccagtctggaggcctgatg
aaggggtttcatctggttggggactacccatcatacaccagtcaaaatcaaggttttttc
atgccttatgatcccatcaactgtcaaacaaacagtagaatgtggaatggaaactacaga
gttaaaccacgcggaaatttcaccagaaatggtgtgtttgaggcaacaaatgagttacct
cgtggtccccgtgccaacggcagaagcgtcccttcaaaaccatctgctgaggaggatcag
cttgtgccaactgttcagagggagaagtataacaaagaggattttaaaactcagtatgat
aatgcaaaattttacattatcaagtcatacagtgaagatgatattcacaagtgtgtcaaa
tatgatgtctggtcaagtactccaaatggtaacaagaaattggacactgccttcgttgaa
gctgaggctaaatcaagtggaactggttcaagctgtccagtgttcctcttcttttctgta
aatggaagtggacagtttttaggtgtagctgagatggttgggcaggttgacttcaacaga
aacatggacttttggcagcttgataaatggagtgggttcttcccactgaagtggcacata
gttaaagatgtccctaatacacagttcaggcacatcatccttgaaaacaatgataataga
cctgtaacctatagcagagatactcaggagattggattgaaggaaggtttggaaatgctt
aacatacttaagaattactcagagaagacatctatattggatgatttcaatttctatgag
aagcgtgagaaagtgctcaaggctaaaaggagttcaaaaccagctattcaagctgatgta
tacgagaaagctgattctcttaagcaattcaaaggaggagacaatatacttgaggaggag
ctgaagaccaactctgctgatccaactgcacctctcgtatctctcaccaaaaacctatcg
attaattcaaggccattcaaaagcagtgtctga
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