Solanum stenotomum: 125853900
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Entry
125853900 CDS
T08385
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sstn03012
]
125853900
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-3
125853900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
ZW10_C2
DUF1722
Curto_V2
Motif
Other DBs
NCBI-GeneID:
125853900
NCBI-ProteinID:
XP_049389616
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All DBs
Position
1:9015883..9021753
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AA seq
922 aa
AA seq
DB search
MASRFWTQGDSDTEEEEESDYELEDDAPAENPDAPSGPGSRYLAADDSDSDESDGQKRVV
RSAKDKRFEELSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRITESIKPPNLYIKA
LVMLEDFLNQALANKETRKKMSSSNAKALNSMKQKLKKNNKQYEELINKYRENPPVSEEE
GGDDEESEEEEEEDGEDFEEDPTKIAAASDDDNDDDSDDPDRPDNRWERMLNKKDKLLDK
QFKDPSQITWETVNKKFKEIVAARGRKGTGKMELVEQLTFLTKVAKTPAQKLEILFGVVS
AQFDINPGLSGHMPINVWKKCLQNMLTILDVLTQYPNIVVDDMVEPDENETQKGADHSGT
IRIWGNLVAFVERIDVEFFKSLQVIDPHTSQYVERLRDEPLFLVLAQNVQRYLEQMGDYK
GAAKVALKQVEFIYYKPQGVYDAMRKLAELTEGGEAESVEENKVVEESRGPTAFIATPEL
VPRKPAFEENSRTLMDSLVSLIYKYGDERTKARAMLCDIYHHAILDEFSTSRDLLLMSHL
QENIQHMDISTQILFNRAMAQLGLCAFRMALVAEAHGCLAELYSAGRVKELLAQGVSQSR
YHEKTPEQERMERRRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANSHDMKRRVISKTF
RRLLEISERQTFTGPPENVRDHVMAATRSLRQGDFQKAFDVINSLDVWRLLRNKDSVLEM
LRGKIKEESLRTYLFTYSASYNSLSLDQVAGMFDLSDSQIHSIVSKMMISEELHASWDQP
SRCMVFHDVEHTRLQALAFQLTEKLSVLAESNERATESRIGGGALEGLPPRRRDGQDYAA
AAAGGGRWQDFSFSQGRQGGSGGRTGYVGGRSTSGQTSRDRTNQARGTLGGQGSRYQSGT
TSRGSQMDGSGRMVNLNRGGRS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtttttggactcagggtgatagtgatacggaagaggaggaggagagtgat
tacgagctggaggatgatgcgccagctgaaaatccagatgcaccgtctgggcctgggtca
agatatcttgcagctgatgacagcgacagtgatgaatcggatggacagaagcgagttgtc
cggtcagccaaggataagcgttttgaggagttgtcagctacagttgatcagatgaagaat
gctatgaagattaatgactgggttagcttgcaggagagctttgacaagattaataagcag
ctggagaaggtcatgcgcattacagaatcaattaaaccaccaaatctctatatcaaagct
ctagtgatgctggaggatttcttgaatcaggcgttggccaataaggagactaggaagaag
atgagtagtagtaatgctaaagccttgaattcaatgaaacagaaactgaaaaagaataat
aagcagtatgaggagttgattaataagtatagggaaaatcctcctgtgagcgaggaggag
ggtggtgatgatgaagagtcagaagaggaagaagaagaggacggagaggactttgaggag
gacccaacaaagattgcagctgcatctgatgatgataatgatgatgatagtgatgatccg
gacaggccagataataggtgggagaggatgctgaacaagaaagacaaacttctggataaa
cagttcaaggatccaagtcaaatcacatgggagacagtcaacaagaagttcaaggaaatc
gttgctgctaggggtagaaaggggactggaaagatggaattggttgaacagctcaccttc
ttgaccaaggtggccaagactccagcacagaagcttgaaattctgtttggtgttgtgtct
gcccagtttgatattaatccaggtctcagtggacacatgcctataaatgtgtggaaaaag
tgtttgcagaatatgcttaccatccttgatgttttgacccaatacccaaacattgtggtt
gatgacatggtggagcctgatgaaaatgagacccagaaaggagcagaccactcagggact
ataagaatctggggaaatttggttgcctttgttgaaaggatagatgtagagtttttcaag
agcttgcaggtaattgatccacataccagccagtatgttgagaggctgagagatgagcca
ttgtttttggttcttgctcaaaatgtccagcgttatttagaacagatgggcgactataag
ggcgctgccaaagtggctcttaaacaggttgaattcatctattataaaccgcaaggagtg
tatgatgctatgaggaagttggctgagctcacagaaggtggagaggcagagtctgtagaa
gaaaacaaagtggttgaggagagtagaggtccaactgcatttattgcaactcctgagctt
gtgcctaggaaacctgcttttgaagagaacagcaggacattgatggacagtctcgtttct
ctcatatataaatatggagatgaacgaaccaaggcccgtgcaatgctctgtgatatatat
caccatgctatcttggatgagttttcaacatcccgtgacttgttattgatgagtcacttg
caggaaaatatccagcacatggacatttcaactcagatactttttaatagagccatggct
caacttgggctctgtgcgttcaggatggcacttgttgcagaagcgcatggttgccttgct
gaactctattctgctggcagggtgaaggagttacttgcgcaaggtgtctcccaaagccga
tatcatgagaagaccccagaacaggagcggatggagaggaggcgtcagatgccctaccat
atgcatataaatcttgagcttcttgaggctgtccatctgacatgtgcaatgcttcttgaa
gtgccaaacatggcagctaatagccatgacatgaagcgcagggtcataagcaaaacattc
cggagattgcttgaaattagtgagaggcaaactttcactggtccacctgaaaatgtgagg
gatcatgtcatggcagcgacaaggtccctcaggcaaggagactttcagaaggcttttgat
gttataaactcccttgatgtgtggaggctgcttcgcaacaaggatagtgttctggagatg
cttagaggcaaaataaaggaagagtcactgaggacctaccttttcacatattctgcttct
tataattctctgagtttggatcaggttgcagggatgtttgacctttcagattctcagatc
catagcatcgtgagcaaaatgatgatttctgaggagcttcatgcaagctgggatcaacca
tcccgatgcatggtctttcatgatgttgagcatacaagattgcaggctttggcattccag
ttgacagaaaagctgtcagttttagcagaaagtaatgaaagagcaacagaatcgaggatt
ggtggtggtgcattggagggccttcccccgaggcgcagggatggccaggattatgctgct
gcagctgcaggtggtggtagatggcaggacttctccttctcacaaggcaggcaaggtggt
agtggtggccgaacagggtatgtaggtggtagatcaacttctggtcaaacatcaagggac
cgtactaatcaggcacgagggactctcggtggtcaaggttcaagatatcagagtggtaca
acttccaggggaagccagatggatggatcaggtcgcatggttaatcttaacagagggggt
cgttcttag
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