Solanum stenotomum: 125854380
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Entry
125854380 CDS
T08385
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
sstn
Solanum stenotomum
Pathway
sstn04145
Phagosome
sstn04517
IgSF CAM signaling
sstn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125854380
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125854380
09142 Cell motility
04814 Motor proteins
125854380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125854380
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sstn04812
]
125854380
04147 Exosome [BR:
sstn04147
]
125854380
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125854380
Cytoskeleton proteins [BR:
sstn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125854380
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125854380
Exosomal proteins of colorectal cancer cells
125854380
Exosomal proteins of bladder cancer cells
125854380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
125854380
NCBI-ProteinID:
XP_049389869
LinkDB
All DBs
Position
2:1220538..1223172
Genome browser
AA seq
451 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGG
RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL
DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSD
TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT
CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAK
NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
PTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
LVAEYQQYQDATADDEEEYDDEAVDDHQYES
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatccttcacattcaaggaggacaatgtggaaaccaaatcggttccaaattc
tgggaagttatctgtgatgaacacggtgttgatcctaccggacgttacaaaggaaccgcc
gctgagtccgatcttcaacttgaacgtatcaatgtttatttcaatgaagcttctggtgga
cgttatgttcctagggctgtgcttatggatctagagcctggtactatggatagtatcaga
tctggtccctatggacagatcttccgtcctgataactttgtgtttggacagtctggtgct
gggaataactgggcgaaaggtcattatactgaaggcgctgagttgatcgatgctgttctc
gatgttgttcgtaaagaagcggagaattgtgattgcttgcaaggattccaggtttgtcac
tcacttggtggagggactggatctggcatgggaacactactgatttccaaggtaagggag
gagtatccagacaggatgatgctcacattctctgttttcccttctccaaaggtgtctgac
actgttgtagaaccatacaatgctacattgtctgtgcaccaattggtggagaatgctgat
gaatgtatggtccttgacaacgaagctctatatgatatttgtttcaggactttgaagctc
actactccaagttttggtgacttgaaccatttgatctctgcaaccatgagtggtgttact
tgctgtttgagatttcctggtcagctgaactcagacctgaggaaattggctgtgaattta
atccccttcccacgtcttcacttcttcatggtgggatttgccccactaacctctcgtgga
tcacagcaatacatatctctaacagtgccagagcttactcaacaaatgtgggatgccaag
aacatgatgtgcgccgcagatccccgtcatggacgttacctgacagcttctgccatgttt
aggggtaagatgagcacaaaggaggtagatgaacagatgatcaatgtgcagaacaagaac
tcatcctattttgttgaatggatccctaacaatgtcaagtctagtgtatgtgatatccca
ccaactgggctgaagatggcatccacatttgttggcaattcaacctccattcaggagatg
tttagaagggtgagtgagcagtttactgccatgttcaggcgcaaggctttcttgcattgg
tacacaggtgaaggaatggatgaaatggagttcactgaagccgagagcaacatgaatgat
ttggttgcagaatatcaacaataccaggatgctacagcagatgatgaggaagagtatgat
gatgaggccgttgatgatcatcaatatgaatcctaa
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