Solanum stenotomum: 125854476
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Entry
125854476 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125854476
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125854476
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125854476
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
SpaA
Motif
Other DBs
NCBI-GeneID:
125854476
NCBI-ProteinID:
XP_049389988
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Position
2:6389055..6400289
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AA seq
670 aa
AA seq
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MGNGRRFKRMIKCLLCACAGQTGACCHSGGPGTMSPIGVRLYIQDRHVMMDNGLVQVTLS
NPDGIVTGIRYNDVDNLLEGLNDESNRGYWDVVWNSPDGGKTGVFEVIKGTNFKVIKETD
DQVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSIGETR
IAFKLRKDKFHYMAVADNRQRFMPLPDDRMPARCQRLAYAEAVLLNNPVEPELRGEVDDK
YQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHY
AGDDLTPNFAQGEAWKKVFGPVFIYLNSVMPGEDPVTLWDDAKIQMQHEVQSWPYSFPVS
EDFPSADQRGSVSGKLLVQDKYISDDHIPANGAYVGLAPPGEAGSWQKECKDYQFWAKSD
NNGNFSINNIRPGDYKLYAWVPGYIGDYLYETPISITPGCSIDVDEIIYHPPRDGPTLWE
IGIPDRTAAEFFVPEPNPKFINKLFVNHPDRFRQYGLWDRYSELYPTDDLVYVTGESDYT
KDWFFTQVPRRKEDGSYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNNPST
NRPVFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTMYLGQPRNQSPFQGIMY
DYIRLEAPPN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgggcgtcgcttcaaacgcatgattaaatgcttattatgcgcgtgcgctgga
caaacaggagcttgttgtcatagtggaggccctggaacaatgtctccaattggagtgaga
ttgtacattcaagaccgccatgtgatgatggataatggcctagtacaagtcacgttatca
aatccagatggaattgtcactggaatacgctataatgacgttgataatctacttgaaggc
cttaacgatgaatctaatagagggtactgggacgttgtctggaattctcccgatggtgga
aaaactggagtatttgaagtgattaagggtactaatttcaaggttataaaggaaacagat
gatcaagtagagatatcattttcgcgaccatgggatccctccctccaaggcaaacttgtt
ccgctgaatattgacaaaaggtttattttgctccgtggctgttctggtttctactcttat
gccatttatgagcatgttggttcacctgagtggcctgctttcagcatcggtgaaaccaga
atagcattcaagctccggaaagataagtttcattatatggctgtggcagacaataggcaa
agattcatgcctctaccagatgaccgaatgcctgcaagatgccagcgccttgcctatgca
gaagcggtccttctgaataatcctgtggagccagagttaagaggagaggtcgatgacaag
taccaatattcatgtgataataaagacaacaaggtccacggctggatatctatggatcca
cctgtgggattctggcaaatcactccaagtgatgaatttcgatccggtggacctgtcaaa
caaaacctcacatcacatgtcggtccaactaccttagctatgtttctaagctctcattac
gctggggatgatctaacaccaaattttgctcaaggtgaagcctggaagaaagtttttggc
cccgtgtttatatatctcaattctgttatgccaggggaagatcctgttactctatgggat
gatgccaagatacagatgcagcatgaagttcaaagttggccttacagttttccagtatct
gaggattttccatcagcagatcaaagaggcagtgttagcggtaaacttttggttcaagac
aagtacattagtgatgatcatatacccgcaaatggcgcttatgtcggccttgctccgcca
ggagaagctggttcctggcaaaaagaatgcaaggactaccaattttgggctaaatcagac
aacaatggaaacttctccataaacaatatacgtcccggtgactacaaactttatgcatgg
gtacctggatacattggggactatctatatgagactcccatttccataactccaggttgt
agtattgatgtggacgaaatcatatatcatcctccaagagatggtcccacattatgggaa
ataggcattcctgatcgtactgctgctgaattttttgttcctgaacccaacccgaaattt
atcaacaagcttttcgtcaatcatcctgacaggtttaggcaatatggattgtgggatagg
tactccgagctatatccaacggatgatcttgtgtatgtaactggagaaagtgattatacc
aaagactggtttttcactcaggttccaaggagaaaagaggacggctcatatcaaggaacg
acatggcaaatcagatttaaacttgattcagtcaatcaaggaggaacgtataaattgcgc
attgcaattgcatctgcaactttagctgaagtgcaggttcgggtgaataatccaagcaca
aatagacctgtattttcaaccggattgattggaagagacaattcaattgctagacatgga
attcacggattatattggctatacaatatagacatacagggaaatttgttagtacaaggg
gacaacaccatgtacttaggccaaccaagaaaccaaagtcctttccaggggattatgtat
gactatattcgtctcgaagctccaccaaactaa
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