Solanum stenotomum: 125854514
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Entry
125854514 CDS
T08385
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125854514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125854514
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125854514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125854514
NCBI-ProteinID:
XP_049390050
LinkDB
All DBs
Position
2:5205664..5207464
Genome browser
AA seq
344 aa
AA seq
DB search
MEDLDKNKLFCGGIPRDTSDEMLKDHFSKYGTVVSSVIAKDRETGRPRGFAFVTFSDPSA
VDLALQDTHEILGRMVEVKKAIPRSEQHQNQQLNSGGLNRNSRTDGRRNDQFRTKKIFVG
GLSASLNQEDFKSYFERFGTITDVVVMHDNVTHRPRGFGFISFDSEDAVEEVMQESFHEL
GGKFVEVKKAIPKDGSNNSGNGYHSRIGNGNGSNYNNIYQQGMYPSYSPSYVYNPGPVSG
YGSVAEYPYGGGTFGGGYPIGAYPGIGYGITSLMPRGPWNNPTMTGLRGGPLPYGNTGGF
YPAYINSGVGVMNMATNGYGGILGAGINEKPGQVSVRDAQEVSD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttggacaaaaacaagcttttttgtggtgggattccgagagatacgagtgat
gagatgcttaaggaccatttttctaagtatggaactgtggttagctctgttattgcaaag
gacagggaaactggtagacctagagggtttgcttttgttaccttttctgacccgtctgca
gttgatttagccctacaagatacccacgaaattcttggaagaatggtagaggtgaaaaaa
gcaatacccaggagtgaacaacaccaaaatcagcaactgaatagtggaggtttgaataga
aatagcagaactgatggtagaaggaatgatcagtttaggaccaagaagatttttgtaggg
gggttatcagctagcttaaatcaggaagatttcaagagttactttgaaaggtttggtacg
attacagatgttgttgtgatgcatgacaacgttacccataggccaaggggatttggtttt
atttcctttgattcggaggatgcagttgaggaggttatgcaggagtctttccatgaacta
ggtggcaagtttgtggaggtcaagaaggctataccaaaagatggaagtaacaatagtggt
aatggttatcattctagaataggtaatggaaatggttccaactataacaatatttatcag
cagggtatgtatccatcttacagtcctagttatgtttataatcccgggcctgtctcgggt
tatggcagtgtggcagaatatccttatggaggtggaactttcggaggtggttatcctatt
ggagcataccctggaattggttatggtatcacttctttgatgcctaggggtccttggaat
aacccaacaatgactggtttgaggggaggtccattgccttatggcaatacaggaggtttt
tatcccgcctacattaatagtggtgtcggagtaatgaacatggctactaatggatatgga
ggaattttgggtgctgggattaatgagaaacctggtcaagttagtgttagagatgctcaa
gaggtgtctgattag
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