Solanum stenotomum: 125854634
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Entry
125854634 CDS
T08385
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125854634
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125854634
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125854634
NCBI-ProteinID:
XP_049390178
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Position
2:complement(63970539..63976696)
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AA seq
336 aa
AA seq
DB search
MAALPYADVDSSLKALAGRAEGFGRFAIGGLNGPVYSVTSLADDGPGSLRDGCRKKEPLW
IVFEVSGTIHLTSYLRVSSHKTIDGRGQRIKLTGKGLQLKDCEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAICASVESQIYSQCNIYEA
TQKKKAFEYYTEKAADKEEARTGLIRSEGDMFLNGAQGSLLTVVGGECVFHPSEFYPVWT
LEPASDSLKAILHICTGWQSIPRPQEECARQLKPAR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgccatatgctgatgtcgattcgagcttaaaagctctagccggtcgagcc
gaagggttcggcagatttgcgatcggcggtctaaatggtccggtctattccgtcacatca
ttggccgatgatggtccaggatcactccgtgatggatgccgtaagaaagaaccactatgg
attgtttttgaagtttcaggcaccattcatctcacgtcatacctacgcgtgtcatcccat
aaaactattgatggtcgtggccaaaggataaaactcactggcaaaggcttacaactgaag
gattgtgagcacataatcgtatgcaatttggagtttgaaggtggcagaggtcatgacgtt
gacggcattcaaataaaaccaaattctaggcacatttggatagaccgctgttctcttcgt
gattatgatgatgggctaatcgatattaccagacaaagcacagatataactatttctaga
tgttattttgctcagcatgataagacaatgcttattggagcagacccgtctcatgttggt
gatagatgtatcagagtgaccatccaccattgctttttcgatgggacgaggcagaggcaa
cctcgtgttagatttggtaaagttcatctgtacaacaattacactagaaattggggtata
tatgctatttgtgctagcgtagaatcacagatatattctcaatgcaacatatatgaagct
acacagaagaaaaaagctttcgaatactacacagagaaggcagcagataaggaggaagca
agaactggtttaattagatctgaaggggacatgtttctgaatggagctcaagggagtttg
ttaactgttgttggtggagagtgtgtttttcatccaagtgaattttaccctgtctggaca
ctggaaccagcctcagactccctcaaagctattctccacatttgcactggttggcaatct
attccccgtccacaggaagagtgtgctcgtcaattgaaacctgcacgctag
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