KEGG   Solanum stenotomum: 125854661
Entry
125854661         CDS       T08385                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125854661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125854661
   03041 Spliceosome [BR:sstn03041]
    125854661
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125854661
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125854661
Spliceosome [BR:sstn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125854661
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 PHM7_cyt
Other DBs
NCBI-GeneID: 125854661
NCBI-ProteinID: XP_049390202
LinkDB
Position
2:63482304..63486320
AA seq 471 aa
MAANNEVKKRKLAKKAPDSIATPSKINKNQPQQQQKTPKSNFSNPPISDSDSDSDPLPVK
IQKLLEPFSKDQLVALAVDTAAALPAFYELIQSNADKDISHRKIFVYGLARETTRPALLS
VFEPYGEIEECNVVMDHATGKAKGYAFVLFKTRKSAAKALKEPQKMINNRLASCKLASMK
ETAVSGTNEFGNRKIYVSNVPKDVNSEKLRSFFAKFGEIEAGPMGFDPSTGKSKGYALFV
YKTVEAAKKCLEKPSKIFEGRQLHCKKAAEGKIGGGAASITTEVVQQPLLAMPPGQGVYA
PVAAGHSMGMLGQNVDVPMMNPFYGGVLANPYGAYGNPFVGVGGFGQQMGGGMGIAAGYG
GRLDGLGGGVSGLGAYGGAGSSTGGSTGGLGAYGGVGSSTGGSTGGLGAYGGVGSRTGGS
TGGLGAYGGVGGSTGGSTGGVVPGLLQLYKQVGQPSSAKHPGSSGYPSHFR
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggctgctaacaacgaggtgaaaaagcgaaagcttgccaagaaggcaccagattccatt
gctacgccctctaaaatcaacaagaatcagccgcagcagcagcaaaaaacacccaaatcc
aatttttctaacccacccatttccgattccgattccgactccgacccattaccggtgaaa
atccagaaacttctcgaacctttctcaaaggatcaactggttgccctagcggtggatacc
gcagctgctctccctgctttttacgagcttatccagtcaaacgctgataaagacatcagt
cacaggaaaatcttcgtttatgggttggcgcgtgagaccacgcgcccggcgctgctgtcc
gtctttgaaccgtatggggagattgaggaatgcaacgttgtgatggatcatgctactgga
aaggctaaagggtatgcctttgttctgtttaagactaggaaatcagctgcgaaagcgctg
aaagagcctcagaagatgatcaacaatcgtttggcttcgtgtaagttggcttcaatgaaa
gagactgctgtttctgggactaatgaatttggtaaccggaagatctacgtgagtaatgtg
ccgaaggatgtgaattcagagaaattgaggagcttttttgctaagtttggggaaattgag
gctggaccaatgggatttgatccatcaactgggaaatcaaaagggtatgctttgtttgtg
tacaaaactgtggaggcggcgaagaaatgtctggaaaaaccctctaagatttttgagggg
aggcaattgcattgcaagaaggcggcggagggcaaaattggtggtggagcggctagtatc
actacggaggttgtacagcagccgctgctggcaatgccaccagggcaaggtgtgtatgct
ccagttgctgctggtcacagtatggggatgttgggtcagaacgtggatgtgccgatgatg
aatccgttttatggtggagtacttgctaatccgtatggagcgtatgggaatccattcgta
ggagttggtggtttcgggcagcaaatgggtggtggaatggggattgcagcaggatatggt
gggaggttagatggtttaggtgggggtgtttcaggtttaggggcatatggtggtgctggt
agcagcacaggtggttctactgggggtttaggggcatatggtggtgttggtagcagcaca
ggtggttctactgggggtttaggggcatatggtggtgttggtagccgcacaggtggttct
actgggggtttaggggcatatggtggtgttggtggcagcacaggtggttctactggggga
gtggtgcccggcttattgcagctctacaagcaggttggccaaccttcatctgcaaagcat
ccaggaagcagtggctacccgtcgcatttcagatga

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