Solanum stenotomum: 125854789
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Entry
125854789 CDS
T08385
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25869
zinc finger protein IDD1/2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125854789
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125854789
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
125854789
NCBI-ProteinID:
XP_049390328
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All DBs
Position
2:2522444..2720286
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AA seq
506 aa
AA seq
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MAEIEKLAGSGSLEETITQQNYPVKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICN
KGFQRDQNLQLHRRGHNLPWKLRQRTSNEVKKRVYVCPESSCVHHDPSRALGDLTGIKKH
FCRKHGEKKFKCERCTKKYAVHSDWKAHMKTCGTREYRCDCGTLFSRRDSFITHRAFCDA
LAQESARSHQPLMEDTNAEGDLKVDEAINKTVSSSSSPPPQPLTPSTGVLSPVLSIQSSE
LPVENQNQGGVQLQQAQGTTTHVSTTPVITISTAAASGPSSSKVFASVFPSSSSAQHVNS
SYSDILRAIETEQVMAVEPMSLSLSSSLYLSNNGPSLFQEHTGGHGHGHGQHYGSATMQP
ALSATALLQKAAQMGSTTSNNSFLRGLGLAISSSASTPEENSLARRTNALGHVKLESNIN
AEVPGLGIQLHGHSGFTDFRMGPSISHQTSMMFGSKPPTLDFLGLGNGASVTPSNGFSAF
LSSMEDGFGVVAEPWDDPSDRKPAML
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcagagattgaaaaattagctggttctggttcattagaagaaacgattacacagcaa
aattatccagtaaagaggaaaaggaatcttcctggaaatcctgatccagaagcagaagtg
atagctttatcaccaaaaactctaatggcgacaaaccgatttgtgtgtgagatttgtaac
aaaggttttcaaagagatcaaaatttacagcttcatcggagaggtcacaacttgccatgg
aaactccggcaacgaacaagcaatgaggtgaaaaaacgtgtttacgtttgtccagaatct
tcatgcgttcatcatgatccttctagagctttaggcgatctcactggaattaagaaacat
ttctgcagaaaacatggtgagaagaagtttaaatgtgaacgttgcaccaaaaaatacgct
gttcattccgattggaaagcacatatgaaaacttgtggtactagagagtatcgttgcgat
tgtggaactttattttccaggagggatagcttcataactcatagagcattttgtgatgca
ttggctcaagaaagtgcaagatctcatcaaccattaatggaggatacaaatgctgaagga
gatttgaaggttgatgaagctattaacaaaacggtgtcgtcttcatctagtccaccacca
caacctttaactccatcaactggcgttctctctccagttctgtccattcaaagttcagaa
ttgcctgtagaaaatcaaaatcaaggtggagtacaattgcaacaagcacaaggtacaaca
acacatgtttctaccacccctgtcatcacaatttccactgctgctgctagtggtcctagt
agtagcaaggtgtttgctagtgtgtttccatcgtcgtcatcagctcagcatgtaaactcg
tcttactcggatattctacgtgctattgagaccgagcaagtgatggctgtagagccgatg
tcactctcattgtcgtcttctctttacttgtctaataatggaccaagtttattccaagaa
cacactggtggccacggccacggccatggccagcattatggttcagcaacaatgcagcca
gcattatctgcaactgcattacttcaaaaagcagcccaaatggggtctacaacctcaaac
aactcgtttctccgtggccttggattggcaatctcatcgagtgcttctacaccggaggag
aattcactagcaaggaggactaatgctctcggccatgtgaagctggagagcaatattaat
gcagaggtacccgggctcgggatacagcttcatggtcattcaggatttactgactttagg
atgggtccatccatatctcatcagacatctatgatgttcggaagcaagcctccgactctt
gattttcttggtttaggaaatggtgcaagtgtaactccatcaaacggattttcagcgttt
ttaagctcaatggaagatggatttggtgttgtagctgagccttgggatgacccttctgat
agaaaacctgctatgctctag
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