Solanum stenotomum: 125854858
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Entry
125854858 CDS
T08385
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125854858
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125854858
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125854858
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
125854858
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125854858
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125854858
Prokaryotic type
125854858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DALR_2
DUF6825
DUF2067
Motif
Other DBs
NCBI-GeneID:
125854858
NCBI-ProteinID:
XP_049390400
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All DBs
Position
2:complement(6699198..6708313)
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AA seq
568 aa
AA seq
DB search
MTTLLKCYKPLLPFQSRKMHIAAAVNSFRYYSRSRLRARCLSTIGNSKSTVDIKVVNGEG
TETELRKQQLWLHNTMSKQKELFIPKVPGKVGMYVCGVTAYDLSHIGHARVYVSFDVLYR
YLNYLGYEVKYVRNFTDVDDKIIARANELGEDPIKLSRLFCEEFHQDMTYLHCLPPSVEP
RVSDHMPQIIDMIQQILDNGCAYRINGDVYFSVDKFPEYGILSGRKLEDNRAGERVAVDT
RKKHPADFALWKTAKAGEPFWESPWGPGRPGWHIECSAMSAAYLGYTFDIHGGGMDLVFP
HHENEIAQSCAACRESNITYWIHNGFVNIDSQKMSKSLGNFFTIRQVIDLYHPLALRLFL
IGTHYRSPINYTIVQIESASDRLFYIYQALYDCQILSTQHDEASLKDSIPAETANCINKF
QDEVLSSISDDLHTPVALAAMSDPLKLINDLLHTRKGKKQALRIESIAALENSIGNVLAI
LGLVPASYAEALHELREKALKRAKLTDDQVHQKIVERDTARKNKDYDRSDVIRKDLAAVG
IALMDSPEGTTWRPAFPLALEEEQVTVP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcttttaaaatgctacaagcctttgcttcccttccaaagccgtaaaatgcac
attgccgccgccgtcaatagtttcaggtactattcgagaagccgacttagggctaggtgc
ctgagtacaatcggaaattcaaagtcaacggtggatataaaagtggttaacggtgaagga
actgagactgaattgaggaagcagcaactatggttacacaatacaatgagcaaacaaaag
gaattatttataccaaaagtgccgggaaaagttggaatgtacgtctgtggtgtaacggcg
tatgatctcagccatatcggccatgctcgcgtttatgtttcctttgatgttctatataga
tacctaaattatttgggatatgaagtcaagtatgttcgcaactttactgatgttgatgac
aagattattgctagagcaaatgagctgggtgaggatccaatcaaattaagcagactcttc
tgcgaagagtttcaccaagacatgacttatcttcactgtcttcctccttcagtggaacct
cgtgtgtctgatcacatgcctcagataatcgatatgattcagcagattctcgataatggt
tgtgcttacagaatcaatggtgatgtctacttttctgtagacaaattcccagaatatgga
atattatctggccgaaaattggaagataatagggcaggagaacgtgtagcagtagacaca
aggaagaagcatccagctgattttgccttgtggaaaactgctaaggcgggagaacctttc
tgggagagtccctggggtccaggaagacctggatggcatattgagtgcagtgccatgagt
gctgcatacttgggatatactttcgacattcatggtggggggatggatctcgtgtttcct
catcatgaaaatgaaattgcccagagctgtgctgcttgtagggagagcaacataacttat
tggatacacaatggatttgtcaacattgactctcagaaaatgtcaaagtcactaggaaac
tttttcacaattcggcaggtgattgatctttatcacccattggcacttaggcttttctta
attgggacacattacagatctccaatcaattacacgattgtacagattgagagtgcatct
gaccgccttttttacatatatcaggcattatatgattgtcaaattctttccacccagcat
gatgaggcaagtttgaaggattctattcctgcagaaactgctaattgtataaataaattc
caagatgaagttttatcttcaatatcagatgatcttcacactcctgttgcactggcagca
atgtcggatccactgaagttgatcaatgatctcttgcatacacgaaagggtaaaaagcaa
gcattgcggatagagtcaattgcggctttagagaattctatagggaatgttctagcaatt
ctggggcttgtgccagccagttatgcagaggctttacatgaattgagggagaaagctttg
aagcgtgcaaagttgactgacgatcaagttcaccagaaaatcgtagagagggatacagca
cgtaaaaataaagattatgatagatcggatgtaattcgaaaagatttggctgctgtaggt
attgctttgatggatagccctgaaggcactacatggagaccagcttttcctcttgcattg
gaagaagagcaggttacagtcccttga
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