KEGG   Solanum stenotomum: 125855128
Entry
125855128         CDS       T08385                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sstn  Solanum stenotomum
Pathway
sstn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125855128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125855128
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     125855128
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_8 F-box LRR_Zer-1
Other DBs
NCBI-GeneID: 125855128
NCBI-ProteinID: XP_049390764
LinkDB
Position
2:14508589..14512063
AA seq 365 aa
MIGVEDLSLDKLFVNNGSRGGVCKMGGGVMMMGEWKDIPMELLLRIASLVDDRTVIVASG
VCSGWRDAISWGLTRLSLSWCKRNMNNLVMTLAPKFTKLQVLTLRQDLPQLEDVGVETIA
NHCHELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDSAVAYLAERCRNLRV
LNLCGCVKAATDKALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCGCV
LITDESVIALANNCPHLRSLGLYFCQYITDRAMYSLAQSRVKNKHEMWASMKKHRYEDEG
LMNLNISQCTALTPPAVQAVCEAFPALHTCPERHSLIISGCLNLTSVHCACSVQAHRARV
LHPAH
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgataggggtagaagatttgagcttggacaagctgtttgtgaacaatggtagcagaggt
ggggtttgtaaaatggggggtggggtgatgatgatgggagagtggaaggatatacctatg
gagttgttgttgaggattgcttcacttgtggatgatcggacggtgattgtggcttctggt
gtttgtagtggatggagagatgcaatttcttggggactcactcgtctttccctttcttgg
tgcaagaggaatatgaataatttagtgatgacacttgcccccaagttcacgaagctgcag
gttctaactcttagacaagatttaccacaacttgaggatgttggtgtcgagacaattgcc
aatcactgtcatgaattgcaagaccttgatcttagcaagagttttaagctaactgatcgt
tccctttatgctttagctcacggctgtccaaacctcacaaagctgaatatcagtgggtgt
tctgctttcagtgatagcgctgttgcatacctagctgagcgttgccgaaacctaagagtc
ttaaacctttgtggttgtgttaaagctgcaactgataaggcattgaaggctattggttac
tactgtaaccgactgcagactgtaaatcttggttggtgcgataaagttggtgatgaaggt
gtaatgagtttggcttatgggtgtcctgatctcagagcccttgatctgtgtggctgtgtc
cttataacagatgagagtgtgattgctttggcaaacaattgccctcacttgagatccctc
ggcctatacttctgtcagtacatcacagatagggcaatgtactctctagctcagagtcgg
gtcaagaacaagcacgagatgtgggcatctatgaagaagcacaggtacgaggacgaaggg
cttatgaatctaaacatcagccaatgcactgctctcacacctcccgctgttcaagcagta
tgcgaagcatttcctgctctgcacacatgccctgagcgacattccctcatcattagcgga
tgcctgaacttaacatcagtgcactgcgcctgctctgtccaagctcaccgtgcgcgtgtt
ctccatccagctcactga

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