Solanum stenotomum: 125855128
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Entry
125855128 CDS
T08385
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125855128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125855128
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125855128
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Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_8
F-box
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
125855128
NCBI-ProteinID:
XP_049390764
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Position
2:14508589..14512063
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AA seq
365 aa
AA seq
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MIGVEDLSLDKLFVNNGSRGGVCKMGGGVMMMGEWKDIPMELLLRIASLVDDRTVIVASG
VCSGWRDAISWGLTRLSLSWCKRNMNNLVMTLAPKFTKLQVLTLRQDLPQLEDVGVETIA
NHCHELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDSAVAYLAERCRNLRV
LNLCGCVKAATDKALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCGCV
LITDESVIALANNCPHLRSLGLYFCQYITDRAMYSLAQSRVKNKHEMWASMKKHRYEDEG
LMNLNISQCTALTPPAVQAVCEAFPALHTCPERHSLIISGCLNLTSVHCACSVQAHRARV
LHPAH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgataggggtagaagatttgagcttggacaagctgtttgtgaacaatggtagcagaggt
ggggtttgtaaaatggggggtggggtgatgatgatgggagagtggaaggatatacctatg
gagttgttgttgaggattgcttcacttgtggatgatcggacggtgattgtggcttctggt
gtttgtagtggatggagagatgcaatttcttggggactcactcgtctttccctttcttgg
tgcaagaggaatatgaataatttagtgatgacacttgcccccaagttcacgaagctgcag
gttctaactcttagacaagatttaccacaacttgaggatgttggtgtcgagacaattgcc
aatcactgtcatgaattgcaagaccttgatcttagcaagagttttaagctaactgatcgt
tccctttatgctttagctcacggctgtccaaacctcacaaagctgaatatcagtgggtgt
tctgctttcagtgatagcgctgttgcatacctagctgagcgttgccgaaacctaagagtc
ttaaacctttgtggttgtgttaaagctgcaactgataaggcattgaaggctattggttac
tactgtaaccgactgcagactgtaaatcttggttggtgcgataaagttggtgatgaaggt
gtaatgagtttggcttatgggtgtcctgatctcagagcccttgatctgtgtggctgtgtc
cttataacagatgagagtgtgattgctttggcaaacaattgccctcacttgagatccctc
ggcctatacttctgtcagtacatcacagatagggcaatgtactctctagctcagagtcgg
gtcaagaacaagcacgagatgtgggcatctatgaagaagcacaggtacgaggacgaaggg
cttatgaatctaaacatcagccaatgcactgctctcacacctcccgctgttcaagcagta
tgcgaagcatttcctgctctgcacacatgccctgagcgacattccctcatcattagcgga
tgcctgaacttaacatcagtgcactgcgcctgctctgtccaagctcaccgtgcgcgtgtt
ctccatccagctcactga
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