Solanum stenotomum: 125855285
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Entry
125855285 CDS
T08385
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00270
Cysteine and methionine metabolism
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
125855285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125855285
03032 DNA replication proteins [BR:
sstn03032
]
125855285
03036 Chromosome and associated proteins [BR:
sstn03036
]
125855285
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sstn02048
]
125855285
Enzymes [BR:
sstn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
125855285
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125855285
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
125855285
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125855285
Prokaryotic defense system [BR:
sstn02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
125855285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
BAH
DNA_methylase
Mak16
Motif
Other DBs
NCBI-GeneID:
125855285
NCBI-ProteinID:
XP_049390954
LinkDB
All DBs
Position
2:complement(40064449..40075721)
Genome browser
AA seq
1548 aa
AA seq
DB search
MGSLALIHSDAGHKKNKHKQDSVSRRKASATDKKEKKQPVSETIEEPTAARKRPKRAAAC
SDFKEKSVHLSKNSSVIETKKDHCVEEEDMAIRLTAGLQDSQRPCRRLTDFVFHNSEGIP
QPFGMSEVDDLFISGLILPLEDSLDKVKAQRIRCEGFGRIEEWAISGYEDGTPVIWISTE
IADYDCIKPSGSYKKFYDHFLAKATACVEVYKKLSKSSGGNPDLNLDELLAGVVRAMTGI
KCFSGGVSIRDFVITQGGFIYKQLIGLDDTSKKTDQLFVELPVLASLKDESSKQETLAQP
EPISSGKALHIGPKAGNGEDKIDESGLANGPAPEDEDLKLAKLLHEEEYWCSLKQKKGRN
TSSSSSKIYIKINEDEIASDYPLPAYYKTSNEETDEYIVFDSGVDTYHIDELPRSMLHNW
ALYNSDSRLISLELLPMKACADIDVTIFGSGVMTADDGSGYNFDTDANHSSLGGSKSAEM
DGMPIYLSAIKEWMIEFGSSMIFISIRTDMAWYRLGKPLKQYAPWYEPVIKTARLAVSII
TLLKEQNRVARLSFGEVIKRVSEFKKDHPAYISSNVDVVERYVVVHGQIILQQFSEFPDA
SIRNCAFAIGLSMKMEERHHTKWVIKKKKVMQRLEQNLNPRASMAPSVKRKAMQATTTRL
INRIWGEYYSNYSPEVSKEVVDFEVKDDEEADEQEENEEDDVPENLDVPEKAHTPSTRRH
IKSCSDSKEIKWDGESIGKTASGEHLFKRARVHGHEIAVGDSVLVEHDEPDELPSMYFVE
YMFEKLDGSKMLHGRMMQRGSDTVLGNAANEREVFLINECMNLQLGDVKESIAVNIRMMP
WGHQHRNTNADKLDRAKAEDRKRKGLPTEFYCKSFYRPVKGAFFRLPFDKMGLGNGLCYS
CELQRTDQEKESFKFDMSNSSFVYLGTEYSVDDFVYVSPDHFTAERGGSGTFKAGRNVGL
MAYVVCQLLEIVGPKGSKQAKVDSTNVKVRRFFRPEDISSDKAYSSDIREIYYSDDIHTV
PVETIEGKCEVRKKYDISSEDVPAIFDHIFFCEYLYDPLNGSLKKLPAQIKLRFSKIKLD
DATSRKRKGKGKEGEDEVGELNETSPQNRLATLDIFAGCGGLSEGLQHSCVTDTNWAIEY
EAPAGDAFRLNHPKTKVFIHNCNVILRAVMQKCGDSDDCISTPEASELAAAMDENELNSL
PLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYYRPKFFLLENVRNF
VSFSQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRVFIWAASPEEVLPEWPEPM
HVFAVPELKIALSETSHYAAVRSTASGAPFRSLTVRDTIGDLPVVGNGACKTCIEYQGDP
VSWFQKKIRGSSITLSDHISKEMNELNLIRCQRIPKRPGADWRDLEDEKVKLSNGQLVDL
IPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECAR
SQGFPDSYQFSGNILHKHRQIGNAVPPPLAYALGRKLKEAVETKKRLT
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcttgcgctcatccatagtgatgctggacacaaaaagaacaaacacaaacaa
gattctgtgtcaagaaggaaggcatctgcaactgataagaaggaaaagaaacagcctgtt
tctgaaactattgaggagcccactgctgcacgtaaaaggcctaagcgagctgctgcctgt
tcagattttaaagagaaatctgtgcatttatcaaaaaattcttcagtcattgaaacaaag
aaggaccattgtgtagaggaagaggatatggctattaggttaactgcaggtctgcaagat
tctcaacgaccctgtagaagattaacggattttgtatttcataactcagaaggaatacca
caaccttttggaatgtctgaggttgatgatctgtttatcagtggtctcattttaccactt
gaggacagtctcgacaaagtaaaagcacaaagaattagatgtgaaggctttgggcgtatt
gaagaatgggctatctctggctatgaagatggaactcctgtcatttggatctcaactgag
atagctgattatgattgtataaaaccctcaggtagttataagaagttttatgaccacttc
ttggccaaggcaacggcttgcgttgaggtttataagaagctttcaaagtcatctggaggg
aatcctgatttaaaccttgacgagttgcttgctggggttgtccgagcgatgactggcata
aaatgcttttcaggtggtgtatccatcagggactttgtcatcactcagggcgggttcatc
tataagcaacttattggtctggatgatacatcaaagaagactgatcaactttttgttgag
ctacctgtcctggcttcccttaaagatgaaagcagtaagcaggagacacttgcacaacca
gagcctatatcatctggtaaggctctacatattggcccaaaagcaggaaatggagaagac
aagatagatgaatctggtttggctaatggtccagcgccagaagatgaagatctgaaattg
gcaaaattgttacatgaagaggagtattggtgctccttgaagcagaagaaaggccgcaat
acgtcttcctcatccagcaaaatatacatcaagatcaatgaggatgagattgcaagtgat
tatcctttacctgcatattacaaaacatctaatgaagagactgatgagtatattgtcttt
gacagtggggttgatacataccatattgatgagttgcctcgcagtatgcttcataattgg
gcattgtacaactcggactcaaggctaatttctttagaactcctgccaatgaaagcatgt
gctgatattgatgtaaccatttttgggtctggagtgatgactgctgatgatgggtctgga
tacaattttgacactgatgctaatcattcctctttaggtggttctaaatcagctgagatg
gatggaatgccaatttacttgagtgcaataaaagaatggatgattgagtttgggtcctca
atgatctttatatcaattcggactgatatggcctggtataggcttgggaagccgttgaaa
cagtatgctccttggtacgaaccagtcataaagactgcaagattggcagtgagcatcatt
actttgttaaaggaacagaatcgtgtggctagactttcttttggagaagttattaaaagg
gtttcagagttcaagaaagaccatcctgcttatatatcatctaatgtagatgtggtggaa
agatatgtggttgtacatgggcaaattattctgcagcagttctctgaatttcctgatgca
agcatcaggaattgtgcatttgcgattggtctctcaatgaaaatggaagagaggcaccat
acaaaatgggtgattaagaagaagaaagtgatgcagagacttgaacagaacttaaatcct
agagcatctatggcgccatctgtaaaaaggaaagctatgcaggctactacaacaaggcta
atcaacagaatctggggggaatactattccaattactcacccgaggtgtcaaaagaggtg
gttgattttgaggtgaaggatgatgaagaagcagatgagcaagaggaaaatgaagaggat
gatgttccggagaacttggatgttccagagaaagctcatacaccttctacaagaaggcat
attaagtcatgttctgacagcaaagaaataaagtgggatggggaatcaataggtaaaaca
gcttctggtgaacatttgtttaaaagggctagagttcatggacatgagatagctgttggg
gactcagttctagtggaacatgatgaaccagatgagcttccttctatgtactttgttgaa
tacatgtttgaaaaattggatggtagcaaaatgcttcatggaagaatgatgcaacgagga
tctgacactgtacttggaaatgcagctaatgagagagaggtatttttgatcaatgaatgc
atgaatctgcaactaggagatgtcaaagaaagtatagctgtcaatatcagaatgatgcct
tggggacaccagcatagaaacacgaatgctgataaacttgatagagcaaaagcagaagac
aggaagaggaagggattgccgactgaattttactgcaaaagcttttatcgccctgtaaaa
ggtgctttcttcagactcccgtttgataagatgggtcttggtaatggtttatgctactcc
tgtgagttgcagcgaactgatcaggaaaaggaatccttcaagtttgatatgtccaactcc
agttttgtatatctggggactgagtattcagttgatgactttgtttatgtaagccccgat
cactttactgccgaaagagggggaagtggaactttcaaagctggaagaaatgtggggttg
atggcctatgtagtatgtcaattactagaaattgttggtcccaagggatctaaacaagct
aaagtagattctacaaacgtcaaagtaaggagattcttcagaccagaggatatatcttca
gataaggcatactcttctgatatccgggagatctattacagtgacgatatacacacagtt
cctgtggaaacaatcgaaggtaaatgtgaagtgaggaagaagtatgatatttcgtctgaa
gacgtccctgccatcttcgaccatattttcttttgtgaatatttgtatgatccattgaat
ggatcccttaaaaagttgccagctcagataaagttgagattctcaaaaattaagctagat
gatgcgacatcaaggaagaggaaggggaagggaaaagaaggagaggatgaagttggggaa
ctaaatgaaacttctcctcagaatcgtttggccacactagatatctttgctggttgtggt
ggcttgtctgaggggctgcagcattcgtgtgtcacagatacaaattgggcaattgaatat
gaagcgcctgctggagatgcatttagacttaatcatccaaagacaaaggtgttcatacat
aattgcaatgtgattttgagggctgtcatgcagaagtgcggagattctgatgactgtatc
tcaactccagaggcttctgaattagctgcagcaatggatgagaacgaactgaatagtttg
ccacttcctggacaagttgatttcattaatggaggccctccttgtcaggggttttctgga
atgaatagatttaatcagagcacctggagtaaagtacagtgcgagatgattctggcattt
ttatcctttgctgattattatcggcctaagttctttctcttggagaatgttaggaatttt
gtgtcgtttagccaaaaacaaacatttcgcttaactgttgcttcccttcttgagatgggt
tatcaggttaggtttggtatccttgaagccggagcctttggagttcctcagtctaggaag
agagtatttatctgggctgcatccccagaggaggttcttccagagtggccagaaccaatg
catgtttttgctgtcccagaattaaaaatcgcattatctgaaacttcacactatgcagct
gtgaggagtactgctagtggagctccattccgttcacttactgttagagacacaattgga
gatcttcctgttgttggcaatggggcatgcaagacttgtatagagtatcaaggtgaccca
gtatcctggttccaaaagaagattcggggaagctcaataacattatctgatcacatttca
aaagagatgaatgagcttaacctaatcaggtgccaaagaattcccaagcggccaggagct
gattggcgtgaccttgaggatgaaaaggttaaactatctaacggtcaactagttgatttg
attccatggtgcctgcctaacactgctaagaggcacaaccagtggaaggggctgtttgga
aggttggattgggatgggaacttccccacttccattactgacccccagccgatgggtaag
gtggggatgtgctttcatccagagcaagacaggattgttacagttcgtgaatgtgcacgt
tctcaaggtttcccagacagctaccaattttctggtaacattttgcacaagcacaggcaa
ataggaaatgctgttccacctcctttggcatatgcacttggaaggaaacttaaagaagct
gttgagaccaagaagaggctcacttag
DBGET
integrated database retrieval system
