Solanum stenotomum: 125855420
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Entry
125855420 CDS
T08385
Name
(RefSeq) transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125855420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125855420
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125855420
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
125855420
NCBI-ProteinID:
XP_049391100
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Position
2:complement(4013418..4018004)
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AA seq
314 aa
AA seq
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MADPYRTNPHAASSLESEDMSSFFLNFLQGTSASASATAAAGFYNRSVPAPVAESSSSLN
FSDPGRFYAAEFKEGVENVFASAGLGDCDGMNPANRREFLEDDKVDNFGFSSEECDGLDM
PSDPTHPRSSKRSRSAEVHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYL
KQLQLQVQMLTLRNGLSLYPGYVPGSMQSVQLPSGNEFDGRSFMLSANGGATLPVNREMP
QTAFEISNQNPSGKPTITSHNTENAVALETTIQNHYGVLNHLASSKDMCRDNTLSRLHLD
MSCSGNNSSSGVSS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgtacagaacgaaccctcacgctgcttcatctctcgaatccgaagatatg
tcttccttttttcttaattttcttcaaggtacgtccgcttccgcttctgcgactgctgcg
gctggtttctataaccgatcggtaccggcgccggtggctgagtcatcttctagcctcaat
ttctccgatcccggtcgattttatgctgccgagttcaaggaaggcgttgagaatgtgttt
gcttctgctggcctcggggattgtgacggtatgaatccagctaataggagagagtttttg
gaagatgataaggttgataactttggtttcagtagcgaggagtgtgatggacttgacatg
ccatctgatccgactcatccacgttcctcaaagaggagtagatctgctgaagttcataat
ttgtccgagaagaggaggaggagtaagatcaatgagaaactgaaagcattgcagaaccta
attccgaattctaacaaaactgacaaggcatctatgcttgatgaagccattgaatatctg
aagcaacttcaactgcaagttcagatgcttaccttgaggaatggattgagtttataccca
ggatatgttcctgggtctatgcagtcggtgcaactcccatctggtaatgaatttgatggg
agaagttttatgctgagtgcaaatggaggagctacacttcctgtgaatcgagaaatgcca
cagactgcatttgaaatttccaatcagaatccatcaggcaagccaacaataacctcacat
aacacagaaaacgctgtagctttagaaactacaattcagaatcattatggagttcttaac
catttagcatcttctaaggacatgtgccgagacaatacactatcaagattgcatttggat
atgagttgctctggaaacaattcatcatcaggagtgtcgtcttaa
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