Solanum stenotomum: 125855645
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Entry
125855645 CDS
T08385
Name
(RefSeq) uncharacterized protein At1g21580 isoform X1
Organism
sstn
Solanum stenotomum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
125855645
NCBI-ProteinID:
XP_049391355
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Position
2:13053585..13066489
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AA seq
1966 aa
AA seq
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MDLPPYHHQHHRHHHHRYVQPPPNFSHNPNFFHHLPPPPQPPQQRLPPPPPPLSNLPPPP
PQRHISHPPLPPSPSPPFHHKSQFSFPSRHSENPRYDYHQNRSPPRVSSNINLNQPPYHP
PHPHPSSFHYNDHYHNPPPPPPPRFTVNDFTSSGLRENRASSVNDSQEPLRVRRDVNSKY
DDDERYRLERRRMDIDTNPSRDFRPSPGNYELRDDRYEDERWEYGGNVDEVPVGSSSRRV
SSLDNGNDYGDVRFSNRLRVDKEEIHRSPQKKQVQKKSALLRIQCGKANNRSRNQDHDLS
SGAVRGKQKDVFERLERRVEEREGSQMELDVSFKSNALVAKAIMTPSSSAIDSDRSEAPR
CKKIRKVNFSGSPTKRIGDDLGKGNGSANDSGCLPSSNQEFNCLADKITVSAVGSSSKCT
LGSYKDSRHLAAKITDSVDGRTSNGTLNNNESKLLPDEDTVSVASSPSNSTSLLSSTVTN
DLTGIKESKESAEIKVLNQGSNHVEKFRIPFFIVRKKKVTKKKVINPINVKLPSDEVVSK
LEKPSKLSAVSKDESVEQSKSDGKKASPAKVLVSSSVEINGVADYTSRSVQSVPSTMNFE
TCMIEVQNKPTSSDADNTGHVGGNSEDELRVSEYGPIKESSESMACEERNGDGREIHKDE
VSSSTEDTYISADSGLGFSDGKKNAVAAIGSFGAGSVEPSSDPNIVPLLTNIEKGLRESF
LNGNDSSSNSDETGRIAVVNDLQTAECLSNSDPRAGTFGGSFESCVDGVTLSPEMRHTKG
SINAVVSVGDDVRIIVDDDCLPKVTRKRKIMDDESVLPTTKMSKTGENVVSYLLGQGNNF
SCFREDHASEEEDGIVSGNGTDSLKGDHSHGGPSEVELSLQDCFKDDSDSCSTKSPKKSE
VSSPAKVKSVPCVTTYEEPSSRPITVPMINDVSVTELESRNTLTNVDDSPLARPSVNVLE
SSSTAKGVCQAEPFEDGLMDHFSDVQQVIPHNSQLGAVGQETTTSVVSIEMLRMADRVSD
DKGSSVGMDQKLAPEGHESCNYVLDRDDMPLLADNLSLFANKVSVKSMESVLDMSPLVSF
PDLTNSSVSEEPIDKSSMSSEIVIEKALRVDENSITAYDNISSSVKTLSDAFEFGRSSDH
KVGGDPLVNVSTVALSSQNTVKSSKNVSSQGWKPNLGANQQSPAGSRVLSVRPSSFITPR
NVPVPKKPLTWHRTGNSSSSVVGRGSQMNALPPQSHLSKDTAKVGSYIRKGNSLVRNPSP
VGSVPKGYHARSSSTYRLNSSGVNDLRRKCENRAEITGSPSCRGTPEVNAPSERPKTPTQ
SESFSCITLVSTSSPVVDHPGNGSIATNSDPMEVTDNILALKPSEHPSTSSAVPECQIGL
GGDSGSQNTLDEGSSKKNIVYVKQRSNQLLAASDKTQTSSDGYYKRRKNQLIRASGNNHM
KQRIVMTKNIVPFQRGTKRLNGLAKISKLSKFSSVWKLGDTQSSRKYGGTVEYEKLWPYL
FPWKRASYRRSFPSSSPSDNSSIIRRKLLLSKKRETIYTRSIHGLSLRRSKVLSVSGSSL
KWSKSIEQRSKKATEAFLQEAALAVAAVDKRKRGQYGFNADSMNGNNVSRKFYSVKLLPG
ERIFRIGCERYKMDSSGKTLQRISDEEPSVSVPEAKKSYIPKRLLIGNDEYVRVGNGNKL
VRNPKRRVRILASEKVRWSLHTARIRLARKKQYCQFFTRFGKCNKDNGKCPYIHDPSKIA
VCSKFLNGSCSDTNCKLTHEVIPERMQDCSYFLQGICANENCPYRHVNVNPNASICEGFL
RGYCADGNECQKKHSYVCPVFEATGNCPKGSKCKLHHPKNRRKGVKRKALSELKNGRGRY
FGSPHIDITECITAGSEKPSVKGNNDIFLEGKFVDFIGLDGSDEEEHTIDQRSEEKPLCE
SGPAEMQLDDLDELIKPMRLINRNRSVGSSPYIDSPSDMTTSYVSE
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcctccctatcaccaccagcaccaccgtcaccatcaccacaggtacgttcaa
cctcctccaaacttttcccataaccctaatttcttccaccaccttcctccgccgccgcag
ccgccacagcaacggcttccaccaccaccaccaccactctccaatctccctccaccacca
cctcagcgccatatctctcacccccctcttcctccttccccatcccctcccttccaccac
aaatcccagttctcctttccttctcgtcattcagaaaaccctcgatacgattatcaccaa
aatcgctctccccctagggtttcctctaatataaacctaaatcaacctccataccacccc
cctcacccgcatccctcaagttttcattataacgaccattaccataaccctcctcctcct
cctccaccgaggtttactgtgaatgattttacctcaagtgggttgagagagaatcgtgct
agctctgtaaacgatagtcaagagcctcttagggttaggagagatgtgaatagcaagtat
gatgatgatgaaaggtaccgtcttgagaggcgtagaatggatattgatacaaacccatcg
agggattttagaccgagtccggggaattatgagttgcgtgatgatagatatgaagatgag
agatgggaatatggtggtaatgttgatgaggttccagttggttcttcttctaggcgagtg
tcttccttggataatggtaatgattacggtgatgttaggtttagcaataggttaagagtg
gacaaggaggaaattcataggtctccgcagaagaagcaagtgcagaagaagagtgcatta
ctcaggattcaatgtgggaaagctaacaacaggagtagaaatcaggaccatgacttgagt
tctggtgcggtaaggggaaagcagaaagatgtgtttgagaggttggagagaagggttgag
gaaagagagggaagtcagatggagcttgatgtttcatttaaatctaatgcacttgtggca
aaggccattatgaccccgtcaagctccgccattgactcagacagaagtgaagcacctaga
tgtaagaagattagaaaagtgaatttctctggttctccaacaaagagaattggggacgat
ttgggaaagggtaatggttcagcaaatgattctggttgcctaccgagttctaaccaggag
ttcaattgtttggcagataaaattacggtttctgcagttggaagttcatctaagtgcact
ttgggttcttacaaggattcaagacacttggcagctaaaattacagattctgttgatgga
cgcacatctaatggtaccttgaataacaacgagtcaaaacttttgcctgatgaagataca
gtttctgttgctagtagtccatctaacagcacttcgttgctgagttccactgtgacaaat
gatttaactggaatcaaagaaagcaaggaatctgcagagatcaaggttttgaatcagggt
agtaatcatgttgagaagtttagaatacctttcttcatagttagaaagaagaaagtgact
aagaagaaagtcataaaccctatcaatgtgaaattgccttcagatgaagtagttagcaaa
ctagaaaaaccttctaaactgtctgctgttagtaaagatgagtctgtagagcagtctaaa
tctgatgggaagaaagctagtccagctaaagtcttggtttcttcaagcgtggaaattaat
ggcgttgctgattataccagcagatcagttcagagtgtcccttccacgatgaattttgag
acatgtatgattgaagtacaaaacaaacctactagttctgatgcggataatactggtcat
gttggagggaattctgaggatgagctccgagtgtccgaatatggtcctattaaagaatct
tctgagtccatggcttgtgaagaaagaaatggcgatgggagagaaattcacaaagatgaa
gtgtcttcgtcaactgaagatacatatatctctgctgattctgggttggggttttctgat
gggaagaagaatgcagttgctgctataggatcctttggagcaggttctgtggagccatcc
agtgaccccaacattgtacctctgttgactaatattgagaaaggactccgagagagtttc
ttgaatggaaatgacagtagttctaattctgatgagactgggagaattgcggttgtcaat
gacttgcaaactgcagagtgtttgagtaatagtgatccaagggctggtacttttggcggt
agttttgaatcatgtgttgatggagtcacattgtcacctgagatgagacatactaaagga
tctatcaatgcagtggtttctgttggagatgatgttaggattattgtggatgatgactgt
ttacctaaggtcaccaggaagaggaagattatggatgacgagtctgttttgcccactacg
aagatgagtaagacaggggaaaatgtggttagttatttgctaggccaaggtaataatttc
agttgttttagagaagatcatgcctctgaagaagaggatggtatagtttctggtaatggg
accgactcactaaagggggatcactcacatggggggccttcagaagtggagctgtcactt
caggattgttttaaagatgattccgattcatgttctaccaagagtcccaagaaaagtgaa
gtttcttcgccagctaaggttaaatctgtaccctgtgttaccacctatgaggaaccttct
agcaggccaattacagtgcctatgatcaatgatgtttccgtgacagagttagaatctcga
aatacattgactaatgtagatgatagtccactagctcgtccatcagtcaatgtgcttgag
agcagcagtactgccaagggtgtatgtcaggctgagccatttgaagatggcttgatggat
cacttttcagatgttcagcaagtcattcctcacaattctcaattgggagcagtgggacaa
gaaactacaacttcagttgtatccattgagatgctaagaatggctgatagagtaagtgat
gacaaaggttcctctgttggaatggaccaaaagttggccccagaaggtcatgaaagctgt
aattatgtgcttgacagggatgacatgcctttattggcagataatctctctttatttgcc
aacaaagtaagtgtcaaaagtatggaatctgtgctggatatgtcaccgctggtgtcattt
cctgacttaactaatagctcagtctctgaggaacctattgataagtcatcaatgtccagt
gaaattgttattgaaaaagccctaagagttgatgaaaattccataacagcttatgacaat
atttcttcttcagtgaagacattgtcagatgcttttgagtttggtagaagttcagatcat
aaagttggtggcgatcctctggttaatgtcagtactgtggcattgtcatcacagaacaca
gtaaaatcctccaagaatgtgagttcacagggttggaaaccaaatctaggtgcaaaccag
caaagtcctgctggctctagggttttatctgttcgcccatcgagttttatcactccaagg
aatgtgcccgttccgaagaagccactgacatggcatagaactggtaatagctcttcctct
gttgttggacgaggttcccaaatgaacgccctacctccacaaagccatttatctaaggac
actgcgaaagtcggctcttacattcgcaagggtaacagtcttgtcagaaatccttctcct
gttggttccgttcccaaaggataccatgctcgaagttcttcaacttaccggttgaactct
tctggtgtgaatgaccttaggagaaaatgtgagaacagggctgagataactggttcacct
agctgcaggggaactccagaagtaaatgctccttcagagagacccaaaaccccgacacag
agcgaatcatttagttgcattacattggtgtctacatcttcaccagtggtagatcatcct
ggaaatggtagtattgctacaaactcagatcctatggaagtaactgacaatattttggcg
ctgaagccttctgagcatccttcaacatcttctgcagttcctgaatgtcaaattggtctg
ggaggtgattctggaagccagaatacattagatgaaggcagttccaaaaagaatatagtt
tatgtgaagcaaagatcgaatcagttacttgcagcttcagataagacccagacttcatcc
gatggctactataagaggagaaagaatcaactgattcgtgcatctggcaataatcatatg
aagcaaagaattgtcatgacaaagaatatagttcctttccaaagaggtacgaaaaggctg
aatggtttagccaagatctctaaattgtcaaagttctcatcggtctggaaattaggtgat
actcagtcatcaaggaaatatggcggcactgtagagtatgagaaactttggccttactta
tttccatggaaaagagctagctatcggaggagtttcccgagttcctctccaagtgacaat
tcctctattatcagacggaagttactgctctcaaaaaagcgggagacaatctacacaagg
tcaattcatggactctctttacgaagatctaaggtgttaagtgtctctggctctagtcta
aagtggtcaaaatctattgagcaaaggtcaaagaaggctactgaggcttttttgcaggaa
gctgcgctagcagttgctgctgttgacaaaaggaaaaggggacaatatggttttaatgct
gactcaatgaatggaaataatgtttctcgtaagttttatagtgtaaagctgctcccagga
gaaaggatattccgcattggttgtgagcggtataagatggactcttctgggaagacacta
caaagaatttcagatgaggaaccatcggtgtcagttccagaggcaaagaaatcttacata
ccgaaaagattattgattgggaacgatgagtatgtacgggttggcaatggtaataagctg
gttagaaatccaaagagacgagttcgcatcttagcaagtgagaaagtacgctggagtttg
cacactgctagaattcggttggcaagaaagaaacagtattgccagttttttacaaggttt
ggcaagtgtaacaaggataatggaaaatgtccttacattcatgatccatctaaaattgcc
gtctgctctaaatttctgaatggttcttgctctgatacaaactgtaaattgactcacgag
gttattcctgaaagaatgcaagactgctcctattttctgcaaggaatatgcgcaaatgag
aattgtccttatagacatgtaaatgtgaatccaaatgcttctatctgtgaaggttttctc
aggggctattgtgctgatggcaatgagtgtcagaagaaacactcctatgtctgccccgtt
tttgaagcaactggcaactgtcccaaaggttcaaaatgcaagcttcaccatccgaaaaac
agaaggaagggagtgaaaaggaaagctttgagcgaattaaagaatggtcgaggtcgttac
tttggctctccgcacattgatattactgagtgcataacagctggatcagagaagccttct
gtcaaggggaataatgacatattccttgaagggaagtttgtcgattttattggcctagat
ggtagcgacgaagaggaacatactattgatcagagaagtgaggaaaagccactttgcgag
agtggtcccgcggagatgcaactggatgatctcgatgagcttattaaacccatgcgtctg
ataaataggaataggtctgtaggttcatctccctacatagatagcccaagtgatatgacc
acaagctatgtatcagagtag
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integrated database retrieval system
